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Series GSE202396 Query DataSets for GSE202396
Status Public on Feb 08, 2023
Title Microbiota exploring in CAVD: the potential fil rouge from aortic valve calcification to infiltrating bacteria
Organism Homo sapiens
Experiment type Other
Summary Comparing bacteriota between calcified aortic valves
 
Overall design Total DNA was extracted from cardiac valve of 20 patients suffering from CAVD, amplified to collect amplicons of variable V3–V4 regions of the bacterial 16s rRNA gene and sequenced with MiSeq (2x300bp) Illumina platform.
 
Contributor(s) ramazzotti m, amedei a, curini l, di gloria l
Citation(s) 36789351
https://doi.org/10.15698%2Fmic2023.02.791
Submission date May 06, 2022
Last update date Jun 02, 2023
Contact name Matteo Ramazzotti
E-mail(s) matteo.ramazzotti@unifi.it
Organization name University of Florence
Department Experimental and Clinical Biomedical Sciences
Street address viale Morgagni 50
City Firenze
ZIP/Postal code 50134
Country Italy
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (20)
GSM6118735 Batteriota of aortic valve from patient G10
GSM6118736 Batteriota of aortic valve from patient G11
GSM6118737 Batteriota of aortic valve from patient G12
Relations
BioProject PRJNA835844

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE202396_otu_taxa.txt.gz 36.3 Kb (ftp)(http) TXT
GSE202396_otus.fasta.gz 437.1 Kb (ftp)(http) FASTA
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
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