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Series GSE201551 Query DataSets for GSE201551
Status Public on Jul 08, 2022
Title Type I interferons promote germinal centers through B cell intrinsic signaling and dendritic cell dependent Th1 and Tfh cell lineages
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Type I interferons (IFNs) play an essential role in antiviral immunity, correlate with severity of systemic autoimmune disease, and are likely to represent a key component of mRNA vaccine-adjuvanticity. Relevant to all, type I IFNs can enhance germinal center (GC) B cell responses but underlying signaling pathways are incompletely understood due to pleiotropic effects in multiple cell types. Here, we demonstrate that a succinct type I IFN response promotes GC formation and associated IgG subclass distribution primarily through signaling in cDCs and B cells. Type I IFN signaling in cDCs, distinct from cDC1, stimulates development of separable Tfh and Th1 cell subsets. However, Th cell-derived IFN-g induces T-bet expression and IgG2c isotype switching prior to this bifurcation and has no evident effects once GCs and bona fide Tfh cells developed. This pathway acts in synergy with early B cell-intrinsic type I IFN signaling, which reinforces T-bet expression in B cells and leads to a selective amplification of the IgG2c+ GC B cell response. Despite the strong Th1 polarizing effect of type I IFNs, the Tfh cell subset develops into IL-4 producing cells that control the overall magnitude of the GCs and promote generation of IgG1+ GC B cells. Thus, type I IFNs act on B cells and cDCs to drive GC formation and to coordinate IgG subclass distribution through parallel Th1 and Tfh cell-dependent pathways. 
 
Overall design mRNA sequencing of sorted IFNAR KO, IFNgR KO and WT splenic GC B cells at D8 after immunization with poly I:C and ovalbumin
 
Contributor(s) Johansson-Lindbom B, Plumb AW
Citation(s) 35911733
Submission date Apr 26, 2022
Last update date Aug 03, 2022
Contact name Bengt Johansson-Lindbom
E-mail(s) bengt.johansson_lindbom@med.lu.se
Organization name Lund University
Department Adaptive Immunity
Street address BMC D1421b
City Lund
ZIP/Postal code 22100
Country Sweden
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (13)
GSM6067457 IFNAR_wt3
GSM6067458 IFNAR_wt4
GSM6067459 IFNgR_ko1
Relations
BioProject PRJNA832211

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Supplementary file Size Download File type/resource
GSE201551_IFNARprocessed.csv.gz 484.0 Kb (ftp)(http) CSV
GSE201551_IFNgRprocessed.csv.gz 335.7 Kb (ftp)(http) CSV
GSE201551_rawcounts.csv.gz 486.8 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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