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Series GSE201316 Query DataSets for GSE201316
Status Public on Apr 25, 2022
Title Tumor-associated and control mammary adipose tissue in lean and high fat diet-induced obese mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the crosstalk between a growing breast cancer tumor and adjacent adipose tissue, we set up an breast cancer mouse model and compared the gene expression between control and tumor-associated adipose tissue.
 
Overall design Female mice, fed either regular chow or high fat diet for 16 weeks, were injected with E0771 cancer cells resuspended in PBS mixed with Matrigel into their left inguinal/mammary fat pad (tumor-associated inguinal adipose tissue) while their right inguinal fat pad (control inguinal adipose tissue) received PBS-Matrigel solution alone. Tumor-associated and control IWAT were collected two weeks after cancer cell injections.
 
Citation(s) 35720277
Submission date Apr 22, 2022
Last update date Jun 21, 2022
Contact name Ingrid Wernstedt Asterholm
E-mail(s) IWA@neuro.gu.se
Organization name University of Gothenburg
Street address Box 432
City Gothenburg
ZIP/Postal code 40530
Country Sweden
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (22)
GSM6058183 0-CL_S5
GSM6058184 2-CL_S1
GSM6058185 3-CL_S2
Relations
BioProject PRJNA830859

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE201316_allCounts.txt.gz 625.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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