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Series GSE20053 Query DataSets for GSE20053
Status Public on Feb 05, 2010
Title C. elegans gene expression in response to Y. pestis KIM5 infection
Organism Caenorhabditis elegans
Experiment type Expression profiling by array
Summary The response of the nematode C. elegans to Y. pestis infection was evaluated by gene expression profiling. A synchronized population of nematodes were exposed to Y. pestis KIM5 for 24h. Transcript levels from Y. pestis-treated animals were compared with animals maintained on relatively nonpathogenic E. coli OP50 for 24h.
 
Overall design Three independent RNA isolations were performed following exposure to either Y. pestis KIM5 or E. coli OP50. Exposures to the different pathogens were performed in parallel for each replicate isolation.
 
Contributor(s) Bolz DD, Tenor JL, Aballay A
Citation(s) 20133945
Submission date Jan 26, 2010
Last update date Jul 06, 2016
Contact name Devin Bolz
Organization name Duke University Medical Center
Department Molecular Genetics and Microbiology
Lab Aballay
Street address 270 Jones Building, Research Drive, Box 3580
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
 
Platforms (1)
GPL200 [Celegans] Affymetrix C. elegans Genome Array
Samples (6)
GSM501248 C. elegans N2_Y. pestis KIM5_24h_Sample A
GSM501268 C. elegans N2_Y. pestis KIM5_24h_Sample B
GSM501269 C. elegans N2_Y. pestis KIM5_24h_Sample C
Relations
BioProject PRJNA124321

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20053_RAW.tar 21.2 Mb (http)(custom) TAR (of CEL, CHP)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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