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Series GSE198833 Query DataSets for GSE198833
Status Public on Oct 06, 2022
Title Single-cell RNA sequencing reveals the impact of CD34+ cells in heart failure
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary CD34+ cells have been used to treat the patients with heart failure, but the outcome is variable. It is of great significance to scrutinize the fate and the mechanism of CD34+ cell differentiation in vivo during heart failure and explore its intervention strategy. By analyzing the transcriptomes of single cells from the Cd34-CreERT2;R26-tdTomato heart, we illustrated the dynamics of cell landscape during the progression of heart hypertrophy, including CD34+ cells, fibroblasts, endothelial cells and immune cells. And Our study also provides a cellular landscape of CD34+ cell-derived cells in the hypertrophy heart of animal models.
 
Overall design scRNA-seq for total non-cardiomyocytes and CD34+ cells from Cd34-CreERT2;R26-tdTomato mice hearts
 
Contributor(s) Du L, SUN X, Xu Q
Citation(s) 36805782
Submission date Mar 17, 2022
Last update date Mar 08, 2023
Contact name Qingbo Xu
E-mail(s) qingbo_xu@zju.edu.cn
Organization name First Affiliated Hospital, Zhejiang University School of Medicine
Department Department of Cardiology
Street address 79 Qingchun Road
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310003
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (7)
GSM5957560 Total_T0
GSM5957561 CD34_T0
GSM5957562 Total_T4
Relations
BioProject PRJNA817182

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198833_RAW.tar 723.0 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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