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Series GSE198521 Query DataSets for GSE198521
Status Public on Mar 15, 2022
Title Single cell transcriptomics of lung retinoid-containing cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We undertook single cell RNA sequencing (scRNA-seq) and bioinformatic analyses to identify roles for different alveolar cell populations in retinoid metabolism and storage.
 
Overall design Transcriptome analysis of lung retinoid-containing cells
 
Contributor(s) Shmarakov IO, Marhaenda-Muňoz M, Blaner WS
Citation(s) 36792627
Submission date Mar 12, 2022
Last update date Jun 01, 2023
Contact name William S Blaner
E-mail(s) wsb2@cumc.columbia.edu
Organization name Columbia University
Department Medicine
Street address 630 West 168th Street
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM5949986 Retinoid-containing lung cells_WI001
GSM5949987 Retinoid-containing lung cells_WI02
Relations
BioProject PRJNA815685

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198521_RAW.tar 141.0 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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