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Series GSE198304 Query DataSets for GSE198304
Status Public on Jun 30, 2022
Title Next Generation Sequencing Facilitates Quantitative Analysis Transcriptomes of dHL-60 cells after capsaicin processed
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To uncoverthe capsaicin effects on the neutrophil activation, we performed transcriptomic of dHL-60 cells after capsaicin stimulation in degree of different time. this study revealed the functional changes of neutrophils in the presence of capsaicin. The transcriptomic data with different time stimulation gradients can contribute to the revealing of dynamic alternation in gene expression and annotate the time-dependent effect of the neutrophil respond to capsaicin.
Overall design dHL-60 cells were processed by 400uM capsaicin for 8 hours, 16 hours, and 24 hours.
Web link
Contributor(s) Chen K, Chen Y
Citation(s) 36071055
Submission date Mar 10, 2022
Last update date Jun 08, 2023
Contact name Kexin Chen
Phone 86-13896212948
Organization name West China hospital
Department Department of Gastroenterology, West China Hospital, Sichuan University, Chengdu, China
Lab Lab of Inflammatory bowel disease, Frontiers Science Center for Disease-Related Molecular Network
Street address No.37 guoxue Lane, Wuhou District, Chengdu city
City Chengdu
State/province Sichuan
ZIP/Postal code 610044
Country China
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (12)
GSM5944741 Differentiated HL-60 neutrophil-like cells rep-1
GSM5944742 Differentiated HL-60 neutrophil-like cells rep-2
GSM5944743 Differentiated HL-60 neutrophil-like cells rep-3
BioProject PRJNA814524

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198304_gene_count.txt.gz 1.8 Mb (ftp)(http) TXT
GSE198304_gene_fpkm.txt.gz 2.9 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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