NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE197645 Query DataSets for GSE197645
Status Public on Nov 14, 2022
Title ChIP-seq of E13.5 Mouse Incisors
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Chromatin state profiling using multiple histone modifications in isolated wild type E13.5 mandibular mouse incisors. Imputed files were generated using these files and data obtained from ENCODE embryonic and postnatal mouse ChIP samples.
 
Overall design Examination of 6 different histone modifications (plus input) for E13.5 mandibular mouse incisor.
Web link https://doi.org/10.3389/fdmed.2022.1009264
 
Contributor(s) Winchester EW, Hardy A, Cotney JL, Mina M
Citation(s) 37034481
NIH grant(s)
Grant ID Grant title Affiliation Name
R03 DE028588 Integrated multi-omics analyses of early mammalian craniofacial development UNIVERSITY OF CONNECTICUT HEALTH CENTER Justin Lee Cotney
R90 DE022526 Skeletal, Craniofacial and Oral Biology Training Grant UNIVERSITY OF CONNECTICUT HEALTH CENTER Mina Mina
T90 DE021989 Skeletal, Craniofacial and Oral Biology Training Grant UNIVERSITY OF CONNECTICUT HEALTH CENTER Mina Mina
F30 DE031149 Uncovering Caries Risk in the Noncoding Genome of the Developing Tooth UNIVERSITY OF CONNECTICUT HEALTH CENTER Emma Wentworth Winchester
Submission date Mar 01, 2022
Last update date May 02, 2023
Contact name Emma Wentworth Winchester
E-mail(s) wentworth@uchc.edu
Organization name UConn Health
Department Genetics and Genome Sciences
Lab Cotney Lab
Street address 400 Farmington Ave
City Farmington
State/province Connecticut
ZIP/Postal code 06030
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (7)
GSM5924295 Incisor H3K27ac
GSM5924296 Incisor H3K36me3
GSM5924297 Incisor H3K27me3
Relations
BioProject PRJNA811449

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197645_RAW.tar 2.5 Gb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap