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Series GSE197238 Query DataSets for GSE197238
Status Public on Feb 27, 2022
Title Cohesin and CTCF control chromosomal contact dynamics in living cells
Organism Mus musculus
Experiment type Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 36471076
Submission date Feb 22, 2022
Last update date Jun 01, 2024
Contact name Luca Giorgetti
Organization name Friedrich Miescher Institute for Biomedical Research
Street address Fabrikstrasse 24
City Basel
ZIP/Postal code 4056
Country Switzerland
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (17)
GSM5911334 cell line 3G4 0min treatment
GSM5911335 cell line 3G4 90min treatment rep1
GSM5911336 cell line 3G4 240min treatment rep1
This SuperSeries is composed of the following SubSeries:
GSE197226 Cohesin and CTCF control chromosomal contact dynamics in living cells [4C-seq]
GSE197231 Cohesin and CTCF control chromosomal contact dynamics in living cells [Hi-C]
GSE197234 Cohesin and CTCF control chromosomal contact dynamics in living cells [capture C]
Relations
BioProject PRJNA809409

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197238_RAW.tar 1.0 Gb (http)(custom) TAR (of BW, COOL, MATRIX)
SRA Run SelectorHelp

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