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Series GSE19711 Query DataSets for GSE19711
Status Public on Mar 01, 2010
Title Genome wide DNA methylation profiling of United Kingdom Ovarian Cancer Population Study (UKOPS)
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in whole blood samples from 540 samples, of which 266 were samples taken from postmenopausal women with ovarian cancer and 274 were from age-matched healthy controls

Keywords: DNA methylation
 
Overall design Bisulphite converted DNA from the 540 samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2
 
Contributor(s) Teschendorff A, Widschwendter M
Citation(s) 20219944
Submission date Dec 31, 2009
Last update date Jan 02, 2015
Contact name Andrew E Teschendorff
E-mail(s) a.teschendorff@ucl.ac.uk
Phone +44 02076790727
Organization name University College London
Department UCL Cancer Institute/Institute for Women's Health
Street address 72 Huntley Street
City London
ZIP/Postal code WC1E 6BT
Country United Kingdom
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (540)
GSM491937 Peripheral Whole Blood 109164
GSM491938 Peripheral Whole Blood 118275
GSM491939 Peripheral Whole Blood 113964
Relations
BioProject PRJNA121901

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE19711_RAW.tar 249.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data included within Sample table

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