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Series GSE196967 Query DataSets for GSE196967
Status Public on Apr 24, 2022
Title Localization of a TORC1-eIF4F translation complex during CD8+ T cell activation drives divergent cell fate
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Activated CD8+ T lymphocytes differentiate into heterogeneous subsets. Using super-resolution imaging, we found that prior to the first division, dynein-dependent vesicular transport polarized active TORC1 towards the microtubule-organizing center (MTOC) at the proximal pole. This active TORC1 was physically associated with active eIF4F, required for the translation of c-myc mRNA. As a consequence, c-myc translating polysomes polarized toward the cellular pole proximal to the immune synapse, resulting in localized c-myc translation. Upon division, the TORC1-eIF4A complex preferentially sorted to the proximal daughter cell, facilitating asymmetric c-Myc synthesis. Transient disruption of eIF4A activity at first division skewed long-term cell fate trajectories to memory-like function. Using a genetic barcoding approach, we found that first-division sister cells often displayed differences in transcriptional profiles that largely correlated with c-Myc and TORC1 target genes. Our findings provide mechanistic insights as to how distinct T cell fate trajectories can be established during the first division.
 
Overall design CTV-labeled GFP-c-Myc OT-I CD8+ T cells were activated on peptide-pulsed APCs for 36 h. First-division GFP-c-Mychigh and GFP-c-Myclow cell populations (CD8+, CTV 2nd peak, highest and lowest 20% GFP-c-Myc) were sorted into medium with or without 200 nM Silvestrol and cultured for additional 2 h.
 
Contributor(s) Liedmann S, Guo A, Chen MJ, Green DR
Citation(s) 35597236
NIH grant(s)
Grant ID Grant title Affiliation Name
P30 CA021765 Cancer Center Support Grant (CCSG) ST. JUDE CHILDREN'S RESEARCH HOSPITAL CHARLES ROBERTS
R01 AI123322 Establishment, maintenance, and consequences of asymmetric cell division in T cells ST. JUDE CHILDREN'S RESEARCH HOSPITAL DOUGLAS R GREEN
R01 AI123322 Establishment, maintenance, and consequences of asymmetric cell division in T cells ST. JUDE CHILDREN'S RESEARCH HOSPITAL DOUGLAS R GREEN
R01 AI123322 Establishment, maintenance, and consequences of asymmetric cell division in T cells ST. JUDE CHILDREN'S RESEARCH HOSPITAL DOUGLAS R GREEN
Submission date Feb 17, 2022
Last update date Jul 24, 2022
Contact name Douglas R Green
E-mail(s) douglas.green@stjude.org
Organization name St Jude Children's Research Hospital
Department Immunology
Lab Green lab
Street address 262 Danny Thomas Pl
City Memphis
State/province United States
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (2)
GSM5905909 Myc binding, control, replicate 1
GSM5905910 Myc binding, silvestrol-treated, replicate 1
Relations
BioProject PRJNA808088

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196967_RAW.tar 235.4 Mb (http)(custom) TAR (of BED, BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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