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Series GSE194051 Query DataSets for GSE194051
Status Public on Jun 09, 2023
Title Mouse model of Heptablastoma
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Lack of relevant animal models and cell lines hampers the understanding of hepatoblastoma and identification of therapeutic targets. We report a hepatoblastoma murine model that faithfully recapitulates the pathological features of mixed fetal and embryonic hepatoblastoma, with transcriptomics resembling the high-risk gene signatures of human disease
 
Overall design Tumor was analyzed from Hepatocellular model at single cell RNA sequencing. The ScRNAseq was performed using 10X genomics -Single cell gene expression kit.
 
Contributor(s) Fang J, Singh S, Natarajan S, Yang J, Chen X
Citation(s) 37414763
Submission date Jan 20, 2022
Last update date Sep 08, 2023
Contact name Jun Yang
Organization name St.Jude Children's Research Hospital
Department Surgery
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38103
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (1)
GSM5827033 Mouse model of Heptablastoma, NEJ146-1
Relations
BioProject PRJNA798919

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE194051_RAW.tar 159.2 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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