|
| Status |
Public on Dec 09, 2022 |
| Title |
An RNAi Screen of RNA Helicases Identifies eIF4A3 as a Regulator of Embryonic Stem Cell Identity |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
36416264 |
| |
| Submission date |
Jan 19, 2022 |
| Last update date |
Dec 10, 2022 |
| Contact name |
Jianlong Wang |
| Organization name |
Columbia University Irving Medical Center
|
| Department |
Department of Medicine
|
| Lab |
Jianlong Wang
|
| Street address |
650 W. 168th St.
|
| City |
New York |
| State/province |
New York |
| ZIP/Postal code |
10032 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (16)
|
| GSM5823856 |
eif4a3KD-ccnb1OE, rep2 |
| GSM5823857 |
CtrlKD-CtrlOE, rep1 |
| GSM5823858 |
CtrlKD-CtrlOE, rep2 |
| GSM5823859 |
eif4a3KD-CtrlOE, rep1 |
| GSM5823860 |
eif4a3KD-CtrlOE, rep2 |
| GSM5823885 |
eif4a3-RPF-KD, rep1 |
| GSM5823886 |
eif4a3-RPF-KD, rep2 |
| GSM5823887 |
eif4a3-totalRNA-KD, rep1 |
| GSM5823888 |
eif4a3-totalRNA-KD, rep2 |
| GSM5825538 |
eif4a3-eCLIP-input, rep1 |
| GSM5825539 |
eif4a3-eCLIP-input, rep2 |
| GSM5825540 |
eif4a3-eCLIP-IP, rep1 |
| GSM5825541 |
eif4a3-eCLIP-IP, rep2 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE193938 |
An RNAi Screen of RNA Helicases Identifies eIF4A3 as a Regulator of Embryonic Stem Cell Identity [RNA-Seq] |
| GSE193940 |
An RNAi Screen of RNA Helicases Identifies eIF4A3 as a Regulator of Embryonic Stem Cell Identity [Ribo-seq] |
| GSE194010 |
An RNAi Screen of RNA Helicases Identifies eIF4A3 as a Regulator of Embryonic Stem Cell Identity [CLIP-seq] |
|
| Relations |
| BioProject |
PRJNA798733 |
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