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GEO accession:
Series GSE190324
Query DataSets for GSE190324
Status
Public on Aug 30, 2022
Title
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Other
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36044854
Submission date
Dec 06, 2021
Last update date
Sep 27, 2022
Contact name
Kate Meyer
E-mail(s)
kate.meyer@duke.edu
Phone
9196849562
Organization name
Duke University School of Medicine
Department
Biochemistry
Street address
307 Research Drive Box 3711
City
D
State/province
NC
ZIP/Postal code
27710
Country
USA
Platforms (3)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (104)
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More...
GSM5719194
CLIP_HEK293T_rep1_input
GSM5719195
CLIP_HEK293T_rep1_CLIP
GSM5719196
CLIP_HEK293T_rep2_input
GSM5719197
CLIP_HEK293T_rep2_CLIP
GSM5719336
CLIP_mHiPPoE-2_rep1_input
GSM5719337
CLIP_mHiPPoE-2_rep1_CLIP
GSM5719338
CLIP_mHiPPoE-2_rep2_input
GSM5719339
CLIP_mHiPPoE-2_rep2_CLIP
GSM5719429
DART_HEK293T-CA-DART_rep1
GSM5719430
DART_HEK293T-CA-DART_rep2
GSM5719431
DART_HEK293T-CA-mut_rep1
GSM5719432
DART_HEK293T-CA-mut_rep2
GSM5719433
DART_HEK293T-nuc-DART_rep1
GSM5719434
DART_HEK293T-nuc-DART_rep2
GSM5719435
DART_HEK293T-nuc-mut_rep1
GSM5719436
DART_HEK293T-nuc-mut_rep2
GSM5719437
DART_HEK293T-cyto-DART_rep1
GSM5719438
DART_HEK293T-cyto-DART_rep2
GSM5719439
DART_HEK293T-cyto-mut_rep1
GSM5719440
DART_HEK293T-cyto-mut_rep2
GSM5719632
DART_mHiPPoE2-CA-DART_rep1
GSM5719633
DART_mHiPPoE2-CA-DART_rep2
GSM5719634
DART_mHiPPoE2-CA-mut_rep1
GSM5719635
DART_mHiPPoE2-CA-mut_rep2
GSM5719636
DART_mHiPPoE2-nuc-DART_rep1
GSM5719637
DART_mHiPPoE2-nuc-DART_rep2
GSM5719638
DART_mHiPPoE2-nuc-mut_rep1
GSM5719639
DART_mHiPPoE2-nuc-mut_rep2
GSM5719640
DART_mHiPPoE2-cyto-DART_rep1
GSM5719641
DART_mHiPPoE2-cyto-DART_rep2
GSM5719642
DART_mHiPPoE2-cyto-mut_rep1
GSM5719643
DART_mHiPPoE2-cyto-mut_rep2
GSM5719712
SY5Y_wt-gm_rep1
GSM5719713
SY5Y_wt-gm_rep2
GSM5719714
SY5Y_wt-dmso_rep1
GSM5719715
SY5Y_wt-dmso_rep2
GSM5719716
SY5Y_wt-ra_rep1
GSM5719717
SY5Y_wt-ra_rep2
GSM5719718
SY5Y_METTL3KO-gm_rep1
GSM5719719
SY5Y_METTL3KO-gm_rep2
GSM5719720
SY5Y_METTL3KO-dmso_rep1
GSM5719721
SY5Y_METTL3KO-dmso_rep2
GSM5719722
SY5Y_METTL3KO-ra_rep1
GSM5719723
SY5Y_METTL3KO-ra_rep2
GSM5719724
SY5Y_control-1-gm_rep1
GSM5719725
SY5Y_control-1-gm_rep2
GSM5719726
SY5Y_control-1-dmso_rep1
GSM5719727
SY5Y_control-1-dmso_rep2
GSM5719728
SY5Y_control-1-ra_rep1
GSM5719729
SY5Y_control-1-ra_rep2
GSM5719730
SY5Y_control-2-gm_rep1
GSM5719731
SY5Y_control-2-gm_rep2
GSM5719732
SY5Y_control-2-dmso_rep1
GSM5719733
SY5Y_control-2-dmso_rep2
GSM5719734
SY5Y_control-2-ra_rep1
GSM5719735
SY5Y_control-2-ra_rep2
GSM5719736
SY5Y_RBM45KO-1-gm_rep1
GSM5719737
SY5Y_RBM45KO-1-gm_rep2
GSM5719738
SY5Y_RBM45KO-1-dmso_rep1
GSM5719739
SY5Y_RBM45KO-1-dmso_rep2
GSM5719740
SY5Y_RBM45KO-1-ra_rep1
GSM5719741
SY5Y_RBM45KO-1-ra_rep2
GSM5719742
SY5Y_RBM45KO-2-gm_rep1
GSM5719743
SY5Y_RBM45KO-2-gm_rep2
GSM5719744
SY5Y_RBM45KO-2-dmso_rep1
GSM5719745
SY5Y_RBM45KO-2-dmso_rep2
GSM5719746
SY5Y_RBM45KO-2-ra_rep1
GSM5719747
SY5Y_RBM45KO-2-ra_rep2
GSM5719748
SY5Y_KORescue-1-gm_rep1
GSM5719749
SY5Y_KORescue-1-gm_rep2
GSM5719750
SY5Y_KORescue-1-dmso_rep1
GSM5719751
SY5Y_KORescue-1-dmso_rep2
GSM5719752
SY5Y_KORescue-1-ra_rep1
GSM5719753
SY5Y_KORescue-1-ra_rep2
GSM5719754
SY5Y_KORescue-2-gm_rep1
GSM5719755
SY5Y_KORescue-2-gm_rep2
GSM5719756
SY5Y_KORescue-2-dmso_rep1
GSM5719757
SY5Y_KORescue-2-dmso_rep2
GSM5719758
SY5Y_KORescue-2-ra_rep1
GSM5719759
SY5Y_KORescue-2-ra_rep2
GSM5719820
mHiPPoE2_wt_rep1
GSM5719821
mHiPPoE2_wt_rep2
GSM5719822
mHiPPoE2_METTL3KO_rep1
GSM5719823
mHiPPoE2_METTL3KO_rep2
GSM5719824
mHiPPoE2_control-1_rep1
GSM5719825
mHiPPoE2_control-1_rep2
GSM5719826
mHiPPoE2_control-2_rep1
GSM5719827
mHiPPoE2_control-2_rep2
GSM5719828
mHiPPoE2_RBM45KO-1_rep1
GSM5719829
mHiPPoE2_RBM45KO-1_rep2
GSM5719830
mHiPPoE2_RBM45KO-2_rep1
GSM5719831
mHiPPoE2_RBM45KO-2_rep2
GSM5719832
mHiPPoE2_KORescue-1_rep1
GSM5719833
mHiPPoE2_KORescue-1_rep2
GSM5719834
mHiPPoE2_KORescue-2_rep1
GSM5719835
mHiPPoE2_KORescue-2_rep2
GSM6215633
CLIP_SHSY5Y-DMSO_rep1_input
GSM6215634
CLIP_SHSY5Y-DMSO_rep1_CLIP
GSM6215635
CLIP_SHSY5Y-DMSO_rep2_input
GSM6215636
CLIP_SHSY5Y-DMSO_rep2_CLIP
GSM6215637
CLIP_SHSY5Y-RA_rep1_input
GSM6215638
CLIP_SHSY5Y-RA_rep1_CLIP
GSM6215639
CLIP_SHSY5Y-RA_rep2_input
GSM6215640
CLIP_SHSY5Y-RA_rep2_CLIP
This SuperSeries is composed of the following SubSeries:
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More...
GSE190287
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs I
GSE190292
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs II
GSE190303
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs III
GSE190311
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs IV
GSE190316
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs V
GSE190322
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs VI
GSE205625
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs VII
Relations
BioProject
PRJNA786639
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE190324_RAW.tar
13.7 Gb
(http)
(custom)
TAR (of BED, BW, MATRIX)
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