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Series GSE188718 Query DataSets for GSE188718
Status Public on May 16, 2022
Title The lactate-NAD axis activate cancer associated fibroblasts by downregulating p62 [Lactate ATAC-seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Reduced p62 levels are associated with the induction of the cancer-associated fibroblast (CAF) phenotype, which promotes tumorigenesis in vitro and in vivo through inflammation and metabolic reprogramming. However, how p62 is downregulated in the stroma fibroblasts by tumor cells to drive CAF activation is an unresolved central issue in the field. Here we show that tumor-secreted lactate downregulate p62 transcriptionally through a mechanism involving reduction of the NAD+/NADH ratio, which impaired poly(ADP-Ribose)-polymerase 1 (PARP1) activity. PARP1 inhibition blocked the poly(ADP-ribosyl)ation of the AP1 transcription factors, c-FOS and c-JUN, which is an obligate step for p62 downregulation. Importantly, restoring p62 levels in CAFs by NAD+ rendered CAFs less active. PARP inhibitors, such as Olaparib, mimicked lactate in the reduction of stromal p62 levels, as well as the subsequent stromal activation both in vitro and in vivo, which suggests that therapies utilizing Olaparib would benefit from strategies aimed at inhibiting CAF activity.
 
Overall design ATACseq samples from WPMY-1 cells treated or not with Lactate 24 mM for 48 h
 
Contributor(s) Linares JF, Cid-Diaz T, Duran A, Martinez-Ordoñez A, Reina-Campos M, Cordes T, Thompson TC, Metallo CM, Moscat J, Diaz-Meco MT
Citation(s) 35545049
Submission date Nov 12, 2021
Last update date Jul 07, 2022
Contact name Jorge Moscat
E-mail(s) jom4010@med.cornell.edu
Organization name WEILL CORNELL MEDICINE
Department Pathology and Laboratory Medicine
Lab Moscat and Diaz-Meco
Street address 1188 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (2)
GSM5688834 WPMY_CTR_rep0 [ATAC-seq]
GSM5688835 WPMY_LACTATE_rep0 [ATAC-seq]
This SubSeries is part of SuperSeries:
GSE188720 The lactate-NAD axis activate cancer associated fibroblasts by downregulating p62.
Relations
BioProject PRJNA779991
SRA SRP345828

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Supplementary file Size Download File type/resource
GSE188718_RAW.tar 2.1 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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