|
| Status |
Public on Jan 19, 2010 |
| Title |
mRNA profiling in rectus abdominis muscle from patients with upper GI cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Rectus abdominis muscle biopsies were obtained from 65 upper gastrointestinal (UGI) cancer patients during open surgery and RNA profiling was performed on a subset of this cohort (n=21) using the Affymetrix U133+2 platform with the aim of identifying biomarkers of cancer related muscle wasting.
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| |
|
| Overall design |
N = 21 (18 UGI cancer; 3 non cancer surgery)
|
| |
|
| Contributor(s) |
Timmons JA, Gallagher IJ |
| Citation(s) |
20193046 |
|
Stephens NA, Gallagher IJ, Rooyackers O, Skipworth RJ, Tan BH, Marstrand T, Ross JA, Guttridge DC, Lundell L, Fearon KC, Timmons JA. Using transcriptomics to identify and validate novel biomarkers of human skeletal muscle cancer cachexia. Genome Medicine, 2:1, Jan 2010. DOI:10.1186/gm122
|
| |
| Submission date |
Oct 30, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Iain Gallagher |
| E-mail(s) |
iaingallagher@gmail.com
|
| Phone |
00 44 1786 46 6024
|
| Organization name |
University of Stirling
|
| Department |
Faculty of Health Sciences and Sport
|
| Street address |
Room 4B133 Cottrell Building, University of Stirling, Airthrey Road
|
| City |
Stirling |
| ZIP/Postal code |
FK9 4LA |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL9486 |
Affymetrix GeneChip Human Genome U133 Plus 2.0 Array [CDF: Hs133P_Hs_ENST, version 10] |
|
| Samples (21)
|
|
| Relations |
| BioProject |
PRJNA121169 |
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