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| Status |
Public on Aug 31, 2022 |
| Title |
The expression of mRNA and lncRNA in peripheral blood mononuclear cells (PBMCs) of diabetes mellitus, diabetic retinopathy (DR), diabetic peripheral neuropathy (DPN) and diabetic nephropathy (DN) patients |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
DR, DPN and DN are common complications in diabetes, and the differentially expressed mRNAs and lncRNAs in these diabetic complications may help to identify the molecular markers for the onset and progression of diseases.
In our study, high-throughput sequencing technique was used to analyze the expression profile of mRNA and lncRNA in the peripheral blood of health control, T2DM, DR, DPN and DN patients, in order to determine the
differentially expressed transcriptomic profiles changes in diabetic complications and identify the shared and specific biological signaling pathways related to DR, DPN and DN.
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| Overall design |
mRNA and lncRNA transcriptional spectrums of peripheral blood mononuclear cells in health control, T2DM, DR, DPN and DN patients were obtained through high-throughput sequencingene technology.
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| Contributor(s) |
Zhu H, Xu J |
| Citation(s) |
35989592 |
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| Submission date |
Sep 29, 2021 |
| Last update date |
Sep 01, 2022 |
| Contact name |
Jin Xu |
| E-mail(s) |
nbusykes@163.com
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| Organization name |
Ningbo University
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| Street address |
818 Fenghua Road
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| City |
Ningbo |
| ZIP/Postal code |
315211 |
| Country |
China |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (25)
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| Relations |
| BioProject |
PRJNA767371 |
| SRA |
SRP339313 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE185011_AllSample_matrix_FPKM.txt.gz |
1.5 Mb |
(ftp)(http) |
TXT |
| GSE185011_New_genes_predict.gtf.gz |
132.6 Kb |
(ftp)(http) |
GTF |
| GSE185011_RAW.tar |
27.6 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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