|
| Status |
Public on Apr 01, 2012 |
| Title |
Small RNAs in the Physcomitrella dcl4 mutant |
| Organism |
Physcomitrium patens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
To study the function of Physcomitrella DCL4, a knockout plant line was created. Small RNAs from ~10-day old protonemata were obtained and sequenced using a SOLiD 2 instrument.
|
| |
|
| Overall design |
A single library each was made from dcl4 mutant protonemata and wild-type protonemata. The dcl4 library was sequenced in four separate technical replicates. The wild-type sample was subject to a single sequencing run.
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| |
|
| Contributor(s) |
Axtell MJ |
| Citation(s) |
22511605 |
| |
| Submission date |
Oct 07, 2009 |
| Last update date |
May 15, 2019 |
| Contact name |
Michael J Axtell |
| E-mail(s) |
mja18@psu.edu
|
| Organization name |
Pennsylvania State University
|
| Department |
Biology
|
| Lab |
Axtell
|
| Street address |
280 Mueller Lab
|
| City |
University Park |
| State/province |
PA |
| ZIP/Postal code |
16802 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9393 |
AB SOLiD System 2.0 (Physcomitrella patens) |
|
| Samples (2) |
|
| Relations |
| SRA |
SRP002324 |
| BioProject |
PRJNA118191 |
