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Series GSE183947 Query DataSets for GSE183947
Status Public on Sep 15, 2021
Title Identification of five cytotoxicity-related genes involved in the progression of breast cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Breast cancer is one of the deadly tumors in women, and its incidence continues to increase. This study aimed to identify novel therapeutic molecules using RNA sequencing (RNAseq) data of breast cancer from our hospitals.
 
Overall design 30 pairs of normal and cancerous tissues from the same excision were collected from the Affiliated Cancer Hospital of Guangzhou Medical University, the Affiliated Cancer Hospital of Sun Yat-sen University and Guangzhou Army General Hospital. RNA sequencing was performed by Guangzhou Huayin Health medical Group. Original reads of RNA sequencing data were normalized as FPKM data.
 
Contributor(s) Zhang Y, Wei XX, Yang WK, Shen H
Citation(s) 35046993
Submission date Sep 11, 2021
Last update date Jan 31, 2022
Contact name Jianhua Xu
Organization name Department of Laboratory Medicine Shunde Hospital of Guangzhou University of Chinese Medicine
Street address No. 12, Jinsha Avenue, Shunde District, Foshan, Guangdong, P.R. China
City Fushan
State/province Guangdong
ZIP/Postal code 528300
Country China
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (60)
GSM5574685 tumor rep1
GSM5574686 tumor rep2
GSM5574687 tumor rep3
Relations
BioProject PRJNA762469
SRA SRP336638

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE183947_fpkm.csv.gz 2.3 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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