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| Status |
Public on Sep 06, 2022 |
| Title |
Epigenetic Remodeling by Vitamin C Potentiates Plasma Cell Differentiation |
| Organism |
Mus musculus |
| Experiment type |
Other
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
36069787 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| K22 CA241290 |
TET-mediated Epigenetic Regulation in the Development and Immunoevasion of B cell Lymphoma |
OHIO STATE UNIVERSITY |
Chan-Wang Jerry Lio |
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| BioProject |
PRJNA759658 |
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| Submission date |
Sep 08, 2021 |
| Last update date |
Dec 06, 2022 |
| Contact name |
Chan-Wang Jerry Lio |
| E-mail(s) |
lio.4@osu.edu
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| Organization name |
Ohio State University
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| Street address |
460 W 12th Ave
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| City |
Columbus |
| State/province |
Ohio |
| ZIP/Postal code |
43210 |
| Country |
USA |
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| Platforms (2) |
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| Samples (37)
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| GSM5567483 |
Day4_B_mock_rep2_Input |
| GSM5567484 |
Day4_B_VC_rep1_Input |
| GSM5567485 |
Day4_B_VC_rep2_Input |
| GSM5567486 |
Naive_B_rep1_5hmC |
| GSM5567487 |
Naive_B_rep2_5hmC |
| GSM5567488 |
Day4_B_mock_rep1_5hmC |
| GSM5567489 |
Day4_B_mock_rep2_5hmC |
| GSM5567490 |
Day4_B_VC_rep1_5hmC |
| GSM5567491 |
Day4_B_VC_rep2_5hmC |
| GSM5567492 |
Naive_B_rep1_RNA |
| GSM5567493 |
Naive_B_rep2_RNA |
| GSM5567494 |
Naive_B_rep3_RNA |
| GSM5567495 |
Day4_B_mock_rep1_RNA |
| GSM5567496 |
Day4_B_mock_rep2_RNA |
| GSM5567497 |
Day4_B_mock_rep3_RNA |
| GSM5567498 |
Day4_B_VC_rep1_RNA |
| GSM5567499 |
Day4_B_VC_rep2_RNA |
| GSM5567500 |
Day4_B_VC_rep3_RNA |
| GSM6254254 |
B cells, mock 4 days, pSTAT3, unstimulated [ChIP-seq] |
| GSM6254255 |
B cells, VC 4 days, pSTAT3, unstimulated [ChIP-seq] |
| GSM6254256 |
B cells, mock 4 days, pSTAT3, IL-21 6h, bio rep 1 [ChIP-seq] |
| GSM6254257 |
B cells, mock 4 days, pSTAT3, IL-21 6h, bio rep 2 [ChIP-seq] |
| GSM6254258 |
B cells, VC 4 days, pSTAT3, IL-21 6h, bio rep 1 [ChIP-seq] |
| GSM6254259 |
B cells, VC 4 days, pSTAT3, IL-21 6h, bio rep 2 [ChIP-seq] |
| GSM6254260 |
WT B cells, mock 4 days, bio rep 1 [A_WT_mock] |
| GSM6254261 |
WT B cells, VC 4 days, bio rep 1 [A_WT_VC] |
| GSM6254262 |
WT B cells, mock 4 days, bio rep 2 [B_WT_mock] |
| GSM6254263 |
WT B cells, VC 4 days, bio rep 2 [B_WT_VC] |
| GSM6254264 |
WT B cells, mock 4 days, bio rep 3 [C_WT_Mock] |
| GSM6254265 |
WT B cells, VC 4 days, bio rep 3 [C_WT_VC_CT] |
| GSM6254266 |
DKO B cells, mock 4 days, bio rep 1 [D_DKO_Mock] |
| GSM6254267 |
DKO B cells, VC 4 days, bio rep 1 [D_DKO_VC] |
| GSM6254268 |
DKO B cells, mock 4 days, bio rep 2 [E_DKO_Mock] |
| GSM6254269 |
DKO B cells, VC 4 days, bio rep 2 [E_DKO_VC] |
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| This SuperSeries is composed of the following SubSeries:
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| GSE183679 |
Vitamin C Potentiates Plasma Cell Differentiation via TET-mediated DNA modification [5hmC] |
| GSE183680 |
Vitamin C Potentiates Plasma Cell Differentiation via TET-mediated DNA modification [RNA-seq] |
| GSE206452 |
Vitamin C Potentiates Plasma Cell Differentiation via TET-mediated DNA modification [ChIP-seq] |
| GSE206453 |
Vitamin C Potentiates Plasma Cell Differentiation via TET-mediated DNA modification [Bisulfite-Seq] |
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