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Series GSE181642 Query DataSets for GSE181642
Status Public on Apr 06, 2024
Title Lysosome activity-dependent changes of gene expression in BMDM after LPS treatment
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report changes of gene expression in lysosome-inhibited BMDM after LPS treatment.
 
Overall design RNA-seq analysis in BMDM treated with lysosome inhibitors after LPS treatment.
Web link https://pubmed.ncbi.nlm.nih.gov/38822028/
 
Contributor(s) Sekine H, Anzawa H, Kinoshita K, Motohashi H
Citation(s) 38822028
Submission date Aug 07, 2021
Last update date Jul 06, 2024
Contact name Hozumi Motohashi
E-mail(s) hozumi.motohashi.a7@tohoku.ac.jp
Phone 81-22-717-8089
Organization name Tohoku University
Department Medical Biochemistry
Street address 2-1 Seiryo-machi, Aoba-ku
City Sendai
ZIP/Postal code 980-8575
Country Japan
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (36)
GSM5508725 conA-0h-1
GSM5508726 conA-0h-2
GSM5508727 conA-2h-1
This SubSeries is part of SuperSeries:
GSE181643 Oxygen-dependent changes and lysosome activity-dependent changes of gene expression in BMDM after LPS treatment
Relations
BioProject PRJNA752789
SRA SRP331467

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181642_RAW.tar 12.1 Mb (http)(custom) TAR (of TAB)
GSE181642_lysosome_AUC.tab.gz 606.7 Kb (ftp)(http) TAB
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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