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Series GSE180656 Query DataSets for GSE180656
Status Public on Nov 18, 2021
Title Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling
Organisms Saccharomyces cerevisiae; Caenorhabditis elegans; Drosophila melanogaster; Homo sapiens; human feces metagenome
Experiment type Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34872593
NIH grant(s)
Grant ID Grant title Affiliation Name
RM1 HG008935 Center for dynamic RNA epitranscriptomes - Renewal UNIVERSITY OF CHICAGO CHUAN HE
Submission date Jul 22, 2021
Last update date Feb 15, 2022
Contact name Tao Pan
E-mail(s) taopan@uchicago.edu
Phone (773) 702-4179
Organization name University of Chicago
Department Biochemistry and Molecular Biology
Street address 929 E. 57th Street
City Chicago
State/province Illinois
ZIP/Postal code 60637
Country USA
 
Platforms (3)
GPL24106 MinION (Homo sapiens)
GPL30425 MinION (Caenorhabditis elegans; Drosophila melanogaster; Homo sapiens; human feces metagenome; Saccharomyces cerevisiae)
GPL30426 Illumina NovaSeq 6000 (Caenorhabditis elegans; Drosophila melanogaster; Homo sapiens; human feces metagenome; Saccharomyces cerevisiae)
Samples (8)
GSM5467024 untreated_rep1
GSM5467025 untreated_rep2
GSM5467026 IFNgamma_rep1
This SuperSeries is composed of the following SubSeries:
GSE180654 Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling (Nanopore)
GSE180655 Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling (Illumina)
Relations
BioProject PRJNA749031

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180656_RAW.tar 81.2 Mb (http)(custom) TAR (of TAR, TSV)
SRA Run SelectorHelp

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