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Series GSE180030 Query DataSets for GSE180030
Status Public on Nov 11, 2021
Title RNA-seq: Transcriptome profile between wild type control and kah mutants in Drosophila embryo
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary We assessed the differential expression of genes in the Drosophila embryo of kah mutants and control to understand how the transcriptional responce in kah mutants.
 
Overall design Two groups of Drosophila embryos (two kah mutants and controls) with three biological replicates per group
 
Contributor(s) Arefin B, Palmer R
Citation(s) 34905617
Submission date Jul 13, 2021
Last update date Feb 02, 2022
Contact name Ruth Palmer
E-mail(s) ruth.palmer@gu.se
Organization name Gothenburg University
Department Medical Biochemistry & Cell Biology
Lab Ruth Palmer
Street address Medicinaregatan 9A, Shalgrenska Academy
City Gothenburg
ZIP/Postal code 41390
Country Sweden
 
Platforms (1)
GPL21306 Illumina HiSeq 4000 (Drosophila melanogaster)
Samples (9)
GSM5448651 w1118_1
GSM5448652 w1118_2
GSM5448653 w1118_3
Relations
BioProject PRJNA746312
SRA SRP328197

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180030_FPKM.xlsx 1.9 Mb (ftp)(http) XLSX
GSE180030_kah-delATGvs_w1118_DEG.txt.gz 1.2 Mb (ftp)(http) TXT
GSE180030_kah-delZnfvs_w1118_DEG.txt.gz 1.2 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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