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Series GSE179598 Query DataSets for GSE179598
Status Public on Sep 08, 2021
Title A time series of the pituitary gland transcriptome during development and sexual maturation in the model fish medaka
Organism Oryzias latipes
Experiment type Expression profiling by high throughput sequencing
Summary Directing both organismal homeostasis and physiological adaptation, the pituitary is a key endocrine gland in all vertebrates. It communicates the needs of the organism to different organs by secreting hormones into the bloodstream. Here, we have used the model fish medaka (Oryzias latipes) to investigate the developmental dynamics in the pituitary using a comprehensive RNA-seq time series from 31 to 375 days post-fertilization.
 
Overall design RNA-seq of the medaka pituitary.
 
Contributor(s) Ager-Wick E, Maugars G, von Krogh K, Fontaine R, Siddique K, Nourizadeh-Lillabadi R, Weltzien F, Henkel C
Citation(s) 34711832, 36720883
Submission date Jul 06, 2021
Last update date Feb 10, 2023
Contact name Khadeeja siddique
E-mail(s) siddique.khadeeja@nmbu.no
Organization name Norwegian University of Life sciences (NMBU))
Street address Karl Staaffs vei 75, house 7
City Oslo
ZIP/Postal code 0665
Country Norway
 
Platforms (1)
GPL27992 Illumina NovaSeq 6000 (Oryzias latipes)
Samples (84)
GSM5421298 medaka1
GSM5421299 medaka10
GSM5421300 medaka100
Relations
BioProject PRJNA744249
SRA SRP327214

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179598_HTSEQ_Count.xlsx 9.9 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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