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Series GSE179393 Query DataSets for GSE179393
Status Public on Dec 20, 2021
Title PRDM16 Is a Compact Myocardium-Enriched Transcription Factor Required to Maintain Compact Myocardial Cardiomyocyte Identity in Left Ventricle
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34915728
Submission date Jul 03, 2021
Last update date Dec 21, 2021
Contact name Ju Chen
E-mail(s) juchen@health.ucsd.edu
Organization name University of California San Diego
Street address 9500 Gilman Drive 0613
City La Jolla
State/province California
ZIP/Postal code 92122
Country USA
 
Platforms (2)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (44)
GSM5416324 Heart.Input.ChIP.Prdm16cKO1
GSM5416325 Heart.Input.ChIP.WT1
GSM5416326 Heart.Input.ChIP.WT2
This SuperSeries is composed of the following SubSeries:
GSE179371 PRDM16 Functions as A Compact Myocardium-Enriched Transcription Factor Required to Maintain Compact Myocardial Cardiomyocyte Identity in Left Ventricle (ChIP-seq)
GSE179386 PRDM16 Functions as A Compact Myocardium-Enriched Transcription Factor Required to Maintain Compact Myocardial Cardiomyocyte Identity in Left Ventricle (bulk RNA-seq)
GSE179390 PRDM16 Functions as A Compact Myocardium-Enriched Transcription Factor Required to Maintain Compact Myocardial Cardiomyocyte Identity in Left Ventricle (scRNA-seq)
Relations
BioProject PRJNA743532

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179393_RAW.tar 316.5 Mb (http)(custom) TAR (of SF, TAR, TIFF)
SRA Run SelectorHelp

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