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| Status |
Public on Sep 14, 2021 |
| Title |
Single-cell RNAseq (10x Genomics) analysis of the abdominal aorta in a murine model of Kawasaki disease vasculitis |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Single-cell RNAseq (10x Genomics) analysis of the abdominal aorta in a murine model of Kawasaki Disease vasculitis (Lactobacillus casei cell wall extract, LCWE) and in control PBS-injected mice
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| Overall design |
Cells were isolated from the abdominal aorta of WT C57BL/6J mice 2 weeks after peritoneal injection of LCWE or PBS. The PBS group was composed of a pool of 9 abdominal aortas, whereas the LCWE group was composed of a pool of 7 abdominal aortas. Single cell suspension were encapsulated for 10x Genomics Single Cell 3′ Reagent Kit (V3 chemistry).
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| Contributor(s) |
Zemmour D, Porritt RA, Noval Rivas M, Arditi M |
| Citation(s) |
34517723 |
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| Submission date |
Jun 23, 2021 |
| Last update date |
Dec 14, 2021 |
| Contact name |
David Zemmour |
| E-mail(s) |
davidpz@fas.harvard.edu, david.puyraimond@gmail.com
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| Organization name |
Harvard Medical Schol
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| Street address |
77 avenue Louis Pasteur
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| City |
Boston |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA740310 |
| SRA |
SRP325346 |
