|
| Status |
Public on Jan 28, 2022 |
| Title |
Systematic analysis of effects of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
35049498 |
| |
| Submission date |
Jun 14, 2021 |
| Last update date |
Feb 03, 2022 |
| Contact name |
Christopher K Glass |
| E-mail(s) |
ckg@ucsd.edu
|
| Phone |
858-534-6011
|
| Organization name |
University of California, San Diego
|
| Department |
CMM
|
| Lab |
Glass Lab
|
| Street address |
9500 Gilman Drive
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92093 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
|
| Samples (23)
|
|
| This SuperSeries is composed of the following SubSeries: |
| GSE178077 |
Systematic analysis of effects of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs [ATAC-seq] |
| GSE178078 |
Systematic analysis of effects of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs [ChIP-seq] |
| GSE178079 |
Systematic analysis of effects of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs [RNA-seq] |
|
| Relations |
| BioProject |
PRJNA737329 |
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