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Series GSE174761 Query DataSets for GSE174761
Status Public on May 21, 2021
Title Bariatric surgery reduces obesity associated breast cancer and enhances response to immunotherapy [Tumor - breast cancer RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Patients undergoing bariatric surgery are protected from subsequent breast cancer risk. It is unknown whether weight loss alone or surgery-specific alterations mediate risk reduction. We examined breast cancer in a pre-clinical model of diet induced obesity (DIO) followed by vertical sleeve gastrectomy (VSG) or dietary weight loss. DIO exacerbated tumor progression compared to lean controls, while VSG-induced weight loss reversed this exacerbation. However, dietary interventions were more effective than VSG despite similar reductions in weight and adiposity, potentially due to elevated immunosuppression after VSG. In tumor bearing mice, anti-PD-L1 immunotherapy after VSG improved anti-tumor immunity and potently impaired tumor progression. Thus, weight loss before tumor onset was protective regardless of intervention. Importantly, immunotherapy specifically improved outcomes in VSG.
 
Overall design RNA-seq data from bulk tumors (orthotopically injected E0771 breast cancer). Female C57BL/6J mice were weaned onto low fat diet (LFD) to remain lean or onto obesogenic high fat diet (HFD) to become obese. After 16 weeks on diet, HFD fed mice displayed marked obesity (Diet Induced Obesity, DIO). DIO mice then underwent surgical or dietary weight loss interventions. 5 Mouse cohorts: 1) Mice were that were lean mice fed low fat diet (LFD), 2) DIO mice fed obesogenic high fat diet (HFD), or mice that lost weight in 3 ways: 4) formerly obese mice receiving bariatric surgery (Vertical sleeve gastrectomy), 5) formerly obese mice with diet switch (DS) from HFD to LFD, or 6) formerly obese mice with caloric restriction (CR) to match weight loss in VSG cohort. All mice not receiving VSG had a sham surgery as a control. E0771 syngeneic breast cancer cells were orthotopically implanted into the 4th mammary fat pad two weeks following surgical or dietary weight loss interventions, when weight loss was stabilized.
 
Contributor(s) Makowski L, Pierre JF, Hayes DN, Sipe LM
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Submission date May 20, 2021
Last update date May 23, 2021
Contact name Liza Makowski
E-mail(s) liza.makowski@uthsc.edu
Organization name UTHSC
Department Medicine- Heme Onc
Lab Makowski Lab CRB 322
Street address 19 South Manassas St
City Memphis
State/province Tennessee
ZIP/Postal code 38163
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (38)
GSM5326675 T400
GSM5326676 T809
GSM5326677 T817
This SubSeries is part of SuperSeries:
GSE174762 Bariatric surgery reduces obesity associated breast cancer and enhances response to immunotherapy
Relations
BioProject PRJNA731483
SRA SRP320678

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174761_RAW.tar 67.2 Mb (http)(custom) TAR (of SF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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