NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE174751 Query DataSets for GSE174751
Status Public on May 21, 2021
Title H3K4 trimethylation is required for postnatal pancreatic endocrine cell functional maturation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary During pancreas development, endocrine progenitors differentiate into the islet-cell subtypes, which undergo further functional maturation in postnatal islet development. In islet b-cells, genes involved in glucose-stimulated insulin secretion are activated and glucose exposure increases the insulin response as b-cells mature. Here, we investigated the role of H3K4 trimethylation in endocrine cell differentiation and functional maturation by disrupting TrxG complex histone methyltransferase activity in mouse endocrine progenitors. In the embryo, genetic inactivation of TrxG component Dpy30 in NEUROG3+ cells did not affect the number of endocrine progenitors or endocrine cell differentiation. H3K4 trimethylation was progressively lost in postnatal islets and the mice displayed elevated non-fasting and fasting glycemia, as well as impaired glucose tolerance by postnatal day 24. Although postnatal endocrine cell proportions were equivalent to controls, islet RNA-sequencing revealed a downregulation of genes involved in glucose-stimulated insulin secretion and an upregulation of immature b-cell genes. Comparison of histone modification enrichment profiles in NEUROG3+ endocrine progenitors and mature islets suggested that genes downregulated by loss of H3K4 trimethylation more frequently acquire active histone modifications during maturation. Taken together, these findings suggest that H3K4 trimethylation is required for the activation of genes involved in the functional maturation of pancreatic islet endocrine cells.
 
Overall design RNA-sequencing of postnatal day 24 control and Dpy30 knockout islets, including 3 biological replicates
 
Contributor(s) Campbell SA, Bégin J, McDonald CL, Vanderkruk B, Stephan TL, Hoffman BG
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 20, 2021
Last update date May 23, 2021
Contact name Brad Hoffman
E-mail(s) brad.hoffman@ubc.ca
Organization name University of British Columbia
Street address Room A4-151 950 W28 Ave
City Vancouver
State/province BC
ZIP/Postal code V5Z 2B3
Country Canada
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (6)
GSM5325922 P24 control islets rep1
GSM5325923 P24 control islets rep2
GSM5325924 P24 control islets rep3
Relations
BioProject PRJNA731470
SRA SRP320666

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174751_RAW.tar 11.2 Mb (http)(custom) TAR (of SF)
GSE174751_all_P24.csv.gz 925.4 Kb (ftp)(http) CSV
GSE174751_resLFCOrdered.csv.gz 1.0 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap