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Series GSE173982 Query DataSets for GSE173982
Status Public on Apr 06, 2022
Title miR-138 controls interneuron function and short-term memory
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Using a miR-138 loss-of-function mouse model, a role for the brain enriched microRNA miR-138 in the regulation of inhibitory synaptic transmission and short-term memory formation was shown.
 
Overall design 3 replicates each from total hippocampal RNA obtained from transgenic mice expressing either an inhibitory sponge transcript (sponge 138) or a control (ctrl) were subjected to polyA-RNA sequencing, followed by differential gene expression analysis.
 
Contributor(s) Daswani R, Dieterich C, Schratt G
Citation(s) 35290180
Submission date May 06, 2021
Last update date May 26, 2022
Contact name Gerhard Schratt
E-mail(s) gerhard.schratt@hest.ethz.ch
Organization name ETH Zürich
Department D-HEST
Lab Systems Neuroscience
Street address Winterthurerstrasse 190
City Zürich
ZIP/Postal code 8057 Zürich
Country Switzerland
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM5283956 415s012844: ctrl_1
GSM5283957 415s012845: ctrl_2
GSM5283958 415s012846: ctrl_3
Relations
BioProject PRJNA727797
SRA SRP318738

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173982_sponge_geneFPKM.csv.gz 829.1 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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