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Series GSE172613 Query DataSets for GSE172613
Status Public on Feb 15, 2022
Title Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35382559, 35921406
Submission date Apr 21, 2021
Last update date Aug 26, 2022
Contact name Diwakar Pattabiraman Pattabiraman
E-mail(s) Diwakar.R.Pattabiraman@Dartmouth.edu
Organization name Geisel School of Medicine at Dartmouth
Department Molecular and Systems Biology
Lab Pattabiraman lab
Street address 1 Medical Center Drive
City LEBANON
State/province NH
ZIP/Postal code 03765
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (35)
GSM5258440 Clone M1 replicate 1 (ATAC-seq)
GSM5258441 Clone M1 replicate 2 (ATAC-seq)
GSM5258442 Clone M2 replicate 1 (ATAC-seq)
This SuperSeries is composed of the following SubSeries:
GSE172608 Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer [ATAC-seq]
GSE172609 Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer [RNA-seq]
Relations
BioProject PRJNA723609

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172613_RAW.tar 1.9 Gb (http)(custom) TAR (of BW, NARROWPEAK, RESULTS)
SRA Run SelectorHelp

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