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Series GSE171995 Query DataSets for GSE171995
Status Public on Apr 14, 2021
Title SARS-CoV-2 infection in pregnancy is associated with robust inflammatory response at the maternal-fetal interface
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Pregnant women appear to be at increased risk for severe outcomes associated with COVID-19, but the pathophysiology underlying this increased morbidity and its potential impact on the developing fetus is not well understood. In this study of pregnant women with and without COVID-19, we assessed viral and immune dynamics at the placenta during maternal SARS-CoV-2 infection. Viral RNA was only rarely detected in the placentas from SARS-CoV-2-positive women in our cohort, with only 1/11 positive for infection at the maternal-fetal interface. Through bulk RNA transcriptomic analyses, we found that placentas from SARS-CoV-2-positive pregnancies exhibited inflammatory markers of immune activation, even in the majority of samples which did not show local invasion of the virus. These markers are associated with pregnancy complications such as preeclampsia and poor fetal outcomes. Overall, this study suggests that SARS-CoV-2 is associated with immune activation at the maternal-fetal interface even in the absence of detectable local viral invasion. While this likely represents a protective mechanism shielding the placenta from infection, inflammatory changes in the placenta may also contribute to poor pregnancy outcomes and thus warrant further investigation.
 
Overall design mRNA profiles of placental villous tissue at term delivery from control and SARS-CoV-2-positive mothers
 
Contributor(s) Pope SD, Lu-Culligan WJ, Lu-Culligan A, Farhadian SF
Citation(s) 33969332
Submission date Apr 13, 2021
Last update date May 28, 2021
Contact name Scott Dean Pope
E-mail(s) scott.pope@yale.edu
Organization name Yale School of Medicine
Department Immunobiology
Lab Ruslan Medzhitov
Street address 300 Cedar St
City New Haven
State/province Connecticut
ZIP/Postal code 06519
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (8)
GSM5239555 control placenta 1 (ctrl1)
GSM5239556 control placenta 2 (ctrl2)
GSM5239557 control placenta 3 (ctrl3)
Relations
BioProject PRJNA721668
SRA SRP314664

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171995_deseq_analysis.csv.gz 1.8 Mb (ftp)(http) CSV
GSE171995_kallisto_counts_genes.csv.gz 1022.4 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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