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Series GSE17194 Query DataSets for GSE17194
Status Public on Jul 22, 2009
Title Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
Organism Oryza sativa
Experiment type Expression profiling by array
Summary phoenix (pho) is a naturally occurring rice (Oryza sativa L.) mutant that exhibits stable inflorescence reversion. Genetic analysis showed that it was not a simple mendelian mutant. In order to find the major genes contributed to the formation of pho, microarray experiments were carried out to analyze and compare the transcriptional profiles between pho and wild-type panicles.
Overall design We generated gene expression profiles of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) by using 57K Affymetrix rice whole genome array.
Contributor(s) Xu W, Wang K, Xue Y, Cheng Z
Citation(s) 20107517
Submission date Jul 20, 2009
Last update date Dec 27, 2017
Contact name Wenying Xu
Organization name Institute of Genetics and Developmental Biology of the Chinese Academy of Sciences
Street address Datun Road, Chaoyang District
City Beijing
ZIP/Postal code 100101
Country China
Platforms (1)
GPL2025 [Rice] Affymetrix Rice Genome Array
Samples (4)
GSM429982 Rice wild-type panicle rep1
GSM429983 Rice mutant phoenix (pho) panicle rep1
GSM429984 Rice wild-type panicle rep2
BioProject PRJNA119221

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17194_RAW.tar 18.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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