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| Status |
Public on Jun 30, 2022 |
| Title |
Dynamic profiling of histone Kcr and Kla during neural differentiation in P19 embryonal carcinoma cells |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
To gain a deeper insight into dynamic changes of histone lysine crotonylation and lactylation during embryonic neurogenesis, ChIP-seq, ATAC-seq and RNA-seq were performed to analyze the genome-wide changes of histone Kcr and Kla in the P19 embryonal carcinoma cells.
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| |
|
| Overall design |
ChIP-seq, ATAC-seq and RNA-seq were both performed with two biological replicates, and sequenced on Illumina NovaSeq 6000 platform.
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| |
|
| Contributor(s) |
Dai SK |
| Citation(s) |
35735108 |
| |
| Submission date |
Apr 10, 2021 |
| Last update date |
Jul 14, 2022 |
| Contact name |
Dai Shang Kun |
| E-mail(s) |
daisk@sdut.edu.cn
|
| Organization name |
Shandong University of Technology
|
| Department |
School of Life Sciences and Medicine
|
| Lab |
Laboratory of Developmental and Evolutionary Biology
|
| Street address |
266 Xincun West Road
|
| City |
Zibo |
| State/province |
Shandong |
| ZIP/Postal code |
255000 |
| Country |
China |
| |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (28)
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| Relations |
| BioProject |
PRJNA721095 |
| SRA |
SRP314312 |
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