NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE171451 Query DataSets for GSE171451
Status Public on Apr 05, 2021
Title Transcriptomic changes of tumor endothelial cells in spontaneous breast tumour model and implanted breast tumour model
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the trancriptomic changes of tumor endothelial cells (ECs) in response to STING activation, tumor ECs from MMTV-PyMT mouse model or implanted breast tumour model were either treated by PBS or cGAMP were sorted by FACS and single-cell RNA seq was performed.
 
Overall design Tumor endothelial cells treated with PBS or cGAMP were sorted and single-cell RNA libraries were made.
 
Contributor(s) Koh G, Jeong S, Yang MJ
Citation(s) 34285232
Submission date Apr 04, 2021
Last update date Jul 28, 2021
Contact name Myung Jin Yang
E-mail(s) mjyang@kaist.ac.kr
Organization name Institute for Basic Science
Street address 34141
City Daejeon
ZIP/Postal code 34141
Country South Korea
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM5225849 MP1
GSM5225850 MP2
GSM5225851 MS1
Relations
BioProject PRJNA719669
SRA SRP313398

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171451_RAW.tar 172.7 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap