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Series GSE16986 Query DataSets for GSE16986
Status Public on Dec 31, 2009
Title Differential accumulation of small RNAs and microRNAs during ovule and fiber development in allotetraploid cotton
Platform organism Arabidopsis thaliana
Sample organism Gossypium hirsutum
Experiment type Non-coding RNA profiling by array
Summary To examine expression of miRNAs in cotton fiber development, we employed miRNA microarrays and compared miRNA accumulation level in cotton fibers, cotton leaves and mutant fibers.
 
Overall design A total of 9 hybridization intensities in three biological replicates per miRNA were obtained.
 
Contributor(s) Chen ZJ, Ha M, Pang M, Woodward A, Agarwal V, Guan X, Ramachandran V, Chen X, Triplett BA, Stelly DM
Citation(s) 19889219
Submission date Jul 07, 2009
Last update date Mar 21, 2012
Contact name Misook Ha
E-mail(s) misook.ha@gmail.com
Phone 7732795900
Organization name National Heart Lung Blood Institute
Lab Laboratory of Epigenome Biology
Street address NIH
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL8814 Arabidopsis thaliana microRNA 0.35K microarray
Samples (36)
GSM455351 N1 ovule 1
GSM455352 N1 ovule 2
GSM455353 N1 ovule 3
Relations
BioProject PRJNA117331

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16986_RAW.tar 1.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data included within Sample table

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