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GEO accession:
Series GSE169555
Query DataSets for GSE169555
Status
Public on Mar 01, 2024
Title
Embryonic lumenogenesis is controlled by selective mRNA decay triggered by LIN28A relocation
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
39054355
Submission date
Mar 24, 2021
Last update date
Oct 09, 2024
Contact name
Jernej Ule
E-mail(s)
j.ule@ucl.ac.uk
Organization name
UCL Institute of Neurology
Department
Neuromuscular Diseases
Lab
RNA Networks Group
Street address
10-12 Russell sq
City
London
ZIP/Postal code
WC1B 5EE
Country
United Kingdom
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (146)
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More...
GSM5209135
lin28a-gfp-episc-primed1
GSM5209136
lin28a-gfp-episc-primed2
GSM5209137
lin28a-gfp-episc-primed3
GSM5209138
lin28a-gfp-episc-primed4
GSM5209139
lin28a-gfp-episc-primed5
GSM5209140
lin28a-gfp-episc-primed6
GSM5209141
lin28a-gfp-esc-highrnase
GSM5209142
lin28a-gfp-esc-naive1
GSM5209143
lin28a-gfp-esc-naive2
GSM5209144
lin28a-gfp-esc-naive3
GSM5209145
lin28a-gfp-esc-naive4
GSM5209146
lin28a-gfp-esc-naive5
GSM5209147
lin28a-gfp-esc-naive6
GSM5209148
lin28a-gfp-esc-naive7
GSM5209149
lin28a-nls-gfp-esc-naive1
GSM5209150
lin28a-nls-gfp-esc-naive2
GSM5209151
lin28a-nls-gfp-esc-naive3
GSM5209152
lin28a-esc-wt-3
GSM5209153
lin28a-esc-wt-4
GSM5209154
lin28a-esc-wt-5
GSM5209160
m6a-esc-mouse-2i-lif-wt-3
GSM5209161
m6a-esc-mouse-2i-lif-wt-2
GSM5209162
m6a-esc-mouse-2i-lif-wt-1
GSM5209212
Quantseq_naïve_ESCs_1
GSM5209213
Quantseq_naïve_ESCs_2
GSM5209214
Quantseq_naïve_ESCs_3
GSM5209215
Quantseq_naïve_ESCs_4
GSM5209216
Quantseq_naïve_ESCs_5
GSM5209217
Quantseq_RSCs_1
GSM5209218
Quantseq_RSCs_2
GSM5209219
Quantseq_RSCs_3
GSM5209220
Quantseq_RSCs_4
GSM5209221
Quantseq_RSCs_5
GSM5209222
Quantseq_EpiSCs_1
GSM5209223
Quantseq_EpiSCs_2
GSM5209224
Quantseq_EpiSCs_3
GSM5209225
Quantseq_EpiSCs_4
GSM5209226
Quantseq_EpiSCs_5
GSM5209227
Quantseq_EpiSCs_6
GSM5209228
Quantseq_T_mesoderm_1
GSM5209229
Quantseq_T_mesoderm_2
GSM5209230
Quantseq_T_mesoderm_3
GSM5209231
Quantseq_T_mesoderm_4
GSM5209232
Quantseq_T_mesoderm_5
GSM5209233
Quantseq_naïve_iLIN28AGFP_untreated_1
GSM5209234
Quantseq_naïve_iLIN28AGFP_untreated_2
GSM5209235
Quantseq_naïve_iLIN28AGFP_untreated_3
GSM5209236
Quantseq_naïve_iLIN28AGFP_untreated_4
GSM5209237
Quantseq_naïve_iLIN28AGFP_dox_1
GSM5209238
Quantseq_naïve_iLIN28AGFP_dox_2
GSM5209239
Quantseq_naïve_iLIN28AGFP_dox_3
GSM5209240
Quantseq_naïve_iLIN28AGFP_dox_4
GSM5209241
embryo_LIN28AGFP_1
GSM5209242
embryo_LIN28AGFP_2
GSM5209243
embryo_LIN28AGFPNLS_1
GSM5209244
embryo_LIN28AGFPNLS_2
GSM5209245
Wt_priming_4sU_only_1
GSM5209246
Wt_priming_4sU_only_2
GSM5209247
Wt_priming_4sU_only_3
GSM5209248
KO_priming_4sU_only_1
GSM5209249
KO_priming_4sU_only_2
GSM5209250
KO_priming_4sU_only_3
GSM5209251
Wt_priming_1hr_U_1
GSM5209252
Wt_priming_1hr_U_2
GSM5209253
Wt_priming_1hr_U_3
GSM5209254
KO_priming_1hr_U_1
GSM5209255
KO_priming_1hr_U_2
GSM5209256
KO_priming_1hr_U_3
GSM5209257
Wt_priming_3hs_U_1
GSM5209258
Wt_priming_3hs_U_3
GSM5209259
KO_priming_3hs_U_1
GSM5209260
KO_priming_3hs_U_2
GSM5209261
KO_priming_3hs_U_3
GSM5209262
Wt_priming_6hr_U_1
GSM5209263
Wt_priming_6hr_U_2
GSM5209264
Wt_priming_6hr_U_3
GSM5209265
KO_priming_6hr_U_1
GSM5209266
KO_priming_6hr_U_2
GSM5209267
KO_priming_6hr_U_3
GSM5209268
Wt_naive_0hrs_1
GSM5209269
Wt_naive_0hrs_2
GSM5209270
Wt_naive_0hrs_3
GSM5209271
Wt_naive_1hrs_1
GSM5209272
Wt_naive_1hrs_2
GSM5209273
Wt_naive_1hrs_3
GSM5209274
Wt_naive_2hrs_1
GSM5209275
Wt_naive_2hrs_2
GSM5209276
Wt_naive_3hrs_1
GSM5209277
Wt_naive_4hrs_1
GSM5209278
Wt_naive_4hrs_2
GSM5209279
Wt_naive_4hrs_3
GSM5209280
Wt_naive_6hrs_1
GSM5209281
Wt_naive_6hrs_2
GSM5209282
Wt_naive_6hrs_3
GSM5209283
Wt_naive_2hrs_3
GSM5209284
Wt_naive_3hrs_2
GSM5209285
Wt_naive_3hrs_3
GSM5209286
Wt_naive_3hrs_4
GSM5209287
iLIN28AGFP_clone A1_a_untreated_0hrs
GSM5209288
iLIN28AGFP_clone A1_a_untreated_1hrs
GSM5209289
iLIN28AGFP_clone A1_a_untreated_2hrs
GSM5209290
iLIN28AGFP_clone A1_a_untreated_3hrs
GSM5209291
iLIN28AGFP_clone A1_a_untreated_4hrs
GSM5209292
iLIN28AGFP_clone A1_a_untreated_6hrs
GSM5209293
iLIN28AGFP_clone A1_b_untreated_0hrs
GSM5209294
iLIN28AGFP_clone A1_b_untreated_1hrs
GSM5209295
iLIN28AGFP_clone A1_b_untreated_2hrs
GSM5209296
iLIN28AGFP_clone A1_b_untreated_3hrs
GSM5209297
iLIN28AGFP_clone A1_b_untreated_4hrs
GSM5209298
iLIN28AGFP_clone A1_b_untreated_6hrs
GSM5209299
iLIN28AGFP_clone A3_a_untreated_0hrs
GSM5209300
iLIN28AGFP_clone A3_a_untreated_1hrs
GSM5209301
iLIN28AGFP_clone A3_a_untreated_2hrs
GSM5209302
iLIN28AGFP_clone A3_a_untreated_3hrs
GSM5209303
iLIN28AGFP_clone A3_a_untreated_4hrs
GSM5209304
iLIN28AGFP_clone A3_a_untreated_6hrs
GSM5209305
iLIN28AGFP_clone A3_b_untreated_0hrs
GSM5209306
iLIN28AGFP_clone A3_b_untreated_1hrs
GSM5209307
iLIN28AGFP_clone A3_b_untreated_2hrs
GSM5209308
iLIN28AGFP_clone A3_b_untreated_3hrs
GSM5209309
iLIN28AGFP_clone A3_b_untreated_4hrs
GSM5209310
iLIN28AGFP_clone A3_b_untreated_6hrs
GSM5209311
iLIN28AGFP_clone A1_a_dox_0hrs
GSM5209312
iLIN28AGFP_clone A1_a_dox_1hrs
GSM5209313
iLIN28AGFP_clone A1_a_dox_2hrs
GSM5209314
iLIN28AGFP_clone A1_a_dox_3hrs
GSM5209315
iLIN28AGFP_clone A1_a_dox_4hrs
GSM5209316
iLIN28AGFP_clone A1_a_dox_6hrs
GSM5209317
iLIN28AGFP_clone A1_b_dox_0hrs
GSM5209318
iLIN28AGFP_clone A1_b_dox_1hrs
GSM5209319
iLIN28AGFP_clone A1_b_dox_2hrs
GSM5209320
iLIN28AGFP_clone A1_b_dox_3hrs
GSM5209321
iLIN28AGFP_clone A1_b_dox_4hrs
GSM5209322
iLIN28AGFP_clone A1_b_dox_6hrs
GSM5209323
iLIN28AGFP_clone A3_a_dox_0hrs
GSM5209324
iLIN28AGFP_clone A3_a_dox_1hrs
GSM5209325
iLIN28AGFP_clone A3_a_dox_2hrs
GSM5209326
iLIN28AGFP_clone A3_a_dox_3hrs
GSM5209327
iLIN28AGFP_clone A3_a_dox_4hrs
GSM5209328
iLIN28AGFP_clone A3_a_dox_6hrs
GSM5209329
iLIN28AGFP_clone A3_b_dox_0hrs
GSM5209330
iLIN28AGFP_clone A3_b_dox_1hrs
GSM5209331
iLIN28AGFP_clone A3_b_dox_2hrs
GSM5209332
iLIN28AGFP_clone A3_b_dox_3hrs
GSM5209333
iLIN28AGFP_clone A3_b_dox_4hrs
GSM5209334
iLIN28AGFP_clone A3_b_dox_6hrs
This SuperSeries is composed of the following SubSeries:
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More...
GSE169547
Embryonic lumenogenesis is controlled by selective mRNA decay triggered by LIN28A relocation [iCLIP]
GSE169549
Embryonic lumenogenesis is controlled by selective mRNA decay triggered by LIN28A relocation [miCLIP]
GSE169552
Embryonic lumenogenesis is controlled by selective mRNA decay triggered by LIN28A relocation [Quant-Seq]
GSE169553
Embryonic lumenogenesis is controlled by selective mRNA decay triggered by LIN28A relocation [RNA-Seq]
GSE169554
Embryonic lumenogenesis is controlled by selective mRNA decay triggered by LIN28A relocation [Slam-Seq]
Relations
BioProject
PRJNA716994
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Format
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TXT
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Size
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File type/resource
GSE169555_RAW.tar
97.1 Mb
(http)
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TAR (of BED, SF)
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