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| Status |
Public on Mar 21, 2022 |
| Title |
Root cell layer specific AGO1-bound sRNA and total sRNA from Arabidopsis ktn1 mutant |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
Other
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| Summary |
We profiled total sRNA and root cell layer specific AGO1-bound sRNA in ktn1 mutant to study the role of KTN1 in miRNA non-cell autonomous activiy in Arabidopsis.
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| Overall design |
Total sRNA and sRNA from GFP-AGO1 IP in plants expression GFP-AGO1 under EN7 (Endodermis) and ACL5 (Metaxylem and procambia) were examined.
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| Contributor(s) |
Fan L, Chen X |
| Citation missing |
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| |
| Submission date |
Mar 12, 2021 |
| Last update date |
Mar 24, 2022 |
| Contact name |
Xuemei Chen |
| E-mail(s) |
lusheng.fan@ucr.edu
|
| Organization name |
University of California
|
| Street address |
900 University AVe
|
| City |
Riverside |
| State/province |
CALIFORNIA |
| ZIP/Postal code |
92521 |
| Country |
USA |
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| Platforms (1) |
| GPL17639 |
Illumina HiSeq 2500 (Arabidopsis thaliana) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA714072 |
| SRA |
SRP310413 |
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