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Series GSE168740 Query DataSets for GSE168740
Status Public on Jul 07, 2021
Title Next Generation Sequencing Facilitates Quantitative Analysis of Honey Bee Brain Transcriptomes Treated by Dinotefuran
Organism Apis mellifera
Experiment type Expression profiling by high throughput sequencing
Summary Purpose:The goals of this study are to obtain NGS-derived honey bee brain transcriptome profiling (RNA-seq) after dinotefuran treatment in honey bee
Methods:Through deep sequencing in triplicate, using Illumina Hiseq2500,a comprehensive analysis of lncRNAs and mRNAs was performed following persistent exposure to 0.01 mg/L dinotefuran for 1, 5, and 10 d.
Results: In total, 312 lncRNAs and 1341 mRNAs, 347 lncRNAs and 1458 mRNAs, 345 lncRNAs and 1155 mRNAs were found to be differentially expressed (DE) on days 1, 5 and 10 respectively.
Conlusions:This study characterized the expression profile of lncRNAs upon exposure to neonicotinoid insecticides in young adult honey bees.
 
Overall design Honey bee brain lncRNA profiles of 1-day old, 5-day-old and 10-day-old dinotefuran treated groups and control groups
 
Contributor(s) Huang M, Dong J, Guo H, wang D
Citation(s) 34217210
Submission date Mar 11, 2021
Last update date Jul 08, 2021
Contact name Minjie Huang
Organization name Zhejiang Academy of Agricultural Sciences
Department Institute of Animal Husbandry and Veterinary Science
Street address No. 145 Shiqiao Road
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310021
Country China
 
Platforms (1)
GPL19174 Illumina HiSeq 2500 (Apis mellifera)
Samples (18)
GSM5163793 C1_1d
GSM5163794 C2_1d
GSM5163795 C3_1d
Relations
BioProject PRJNA713798
SRA SRP310279

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168740_RAW.tar 3.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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