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Series GSE166906 Query DataSets for GSE166906
Status Public on Aug 24, 2021
Title Synthetic essentiality between PTEN and core dependency factor PAX7 dictates rhabdomyosarcoma identity
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Feb 17, 2021
Last update date Aug 25, 2021
Contact name Hongjian Jin
E-mail(s) hongjian.jin@STJUDE.ORG
Organization name St Jude Children's Research Hospital
Department Center for Applied Bioinformatics
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38015
Country USA
 
Platforms (3)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (29)
GSM5085927 ASPcKO tumor 1
GSM5085928 ASPcKO tumor 2
GSM5085929 ASPcKO tumor 3
This SuperSeries is composed of the following SubSeries:
GSE166808 Quantitative assessment of transcriptomic differences between ASPcKO and ASPcKOP7cKO flow cytometry-sorted murine FN-RMSs by RNA sequencing
GSE166809 Differences in gene expression between ASP WT and ASPcKO tumors
GSE166810 Transcriptomic changes in SJRHB015721_X1 human FN-RMS following DBX1 knock-down
Relations
BioProject PRJNA702273

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE166906_RAW.tar 119.6 Mb (http)(custom) TAR (of CEL, TXT)
SRA Run SelectorHelp

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