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Series GSE165679 Query DataSets for GSE165679
Status Public on Jan 29, 2021
Title MreCD are required for correct cell shape, biofilm architecture and interspecies competition in Streptococcus mutans
Organism Streptococcus mutans
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq was utilized to compare the transcriptomes of wild-type and ΔmreCD S. mutans strains
 
Overall design Streptococcus mutans mRNA profiles were generated for a wild-type control strain and a strain lacking the mreCD genes, by deep sequencing, in triplicate
 
Contributor(s) Shields RC
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NIH grant(s)
Grant ID Grant title Affiliation Name
R01 DE013239 Genetics and Physiology of Oral Biofilms UNIVERSITY OF FLORIDA Robert A Burne
Submission date Jan 28, 2021
Last update date Jan 31, 2021
Contact name Robert Colquhoun Shields
E-mail(s) rshields@astate.edu
Organization name Arkansas State University
Department Biological Sciences
Lab Shields
Street address Lab Science East
City Jonesboro
State/province Arkansas
ZIP/Postal code 72467
Country USA
 
Platforms (1)
GPL21130 Illumina NextSeq 500 (Streptococcus mutans)
Samples (6)
GSM5048126 UA159 1
GSM5048127 UA159 2
GSM5048128 UA159 3
Relations
BioProject PRJNA695444
SRA SRP303607

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165679_RAW.tar 200.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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