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GEO accession:
Series GSE165180
Query DataSets for GSE165180
Status
Public on Apr 19, 2022
Title
Multi-omic rejuvenation of human cells by maturation phase transient reprogramming
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Methylation profiling by genome tiling array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
35390271
Submission date
Jan 20, 2021
Last update date
Apr 22, 2022
Contact name
Felix Krueger
E-mail(s)
fkrueger@altoslabs.com
Organization name
Altos Labs
Department
Bioinformatics
Street address
Granta Park
City
Cambridge
ZIP/Postal code
CB21 6GP
Country
United Kingdom
Platforms (2)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL21145
Infinium MethylationEPIC
Samples (337)
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GSM5027507
N2_d11_CD13_Sendai_Exp1
GSM5027508
N2_d11_CD13_Sendai_Exp2
GSM5027509
N2_d11_SSEA4_Sendai_Exp1
GSM5027510
N2_d11_SSEA4_Sendai_Exp2
GSM5027511
N2_d13_CD13_Sendai_Exp1
GSM5027512
N2_d13_SSEA4_Sendai_Exp1
GSM5027513
N2_d15_CD13_Sendai_Exp1
GSM5027514
N2_d15_SSEA4_Sendai_Exp1
GSM5027515
N2_d21_CD13_Sendai_Exp2
GSM5027516
N2_d21_SSEA4_Sendai_Exp2
GSM5027517
N2_d29_CD13_Sendai_Exp2
GSM5027518
N2_d29_SSEA4_Sendai_Exp2
GSM5027519
N2_d34_SSEA4_Sendai_Exp2
GSM5027520
N2_d40_SSEA4_Sendai_Exp2
GSM5027521
N2_d47_SSEA4_Sendai_Exp2
GSM5027522
N2_d54_SSEA4_Sendai_Exp2
GSM5027523
N2_d7_CD13_Sendai_Exp1
GSM5027524
N2_d7_SSEA4_Sendai_Exp1
GSM5027525
N2_d9_CD13_Sendai_Exp1
GSM5027526
N2_d9_SSEA4_Sendai_Exp1
GSM5027527
N2_Fib_Sendai_Exp2
GSM5027528
N3_d11_CD13_Sendai_Exp1
GSM5027529
N3_d11_CD13_Sendai_Exp2
GSM5027530
N3_d11_SSEA4_Sendai_Exp1
GSM5027531
N3_d11_SSEA4_Sendai_Exp2
GSM5027532
N3_d13_CD13_Sendai_Exp1
GSM5027533
N3_d13_SSEA4_Sendai_Exp1
GSM5027534
N3_d15_CD13_Sendai_Exp1
GSM5027535
N3_d15_SSEA4_Sendai_Exp1
GSM5027536
N3_d21_CD13_Sendai_Exp2
GSM5027537
N3_d21_SSEA4_Sendai_Exp2
GSM5027538
N3_d29_CD13_Sendai_Exp2
GSM5027539
N3_d29_SSEA4_Sendai_Exp2
GSM5027540
N3_d34_SSEA4_Sendai_Exp2
GSM5027541
N3_d40_SSEA4_Sendai_Exp2
GSM5027542
N3_d47_SSEA4_Sendai_Exp2
GSM5027543
N3_d54_SSEA4_Sendai_Exp2
GSM5027544
N3_d7_CD13_Sendai_Exp1
GSM5027545
N3_d7_SSEA4_Sendai_Exp1
GSM5027546
N3_d9_CD13_Sendai_Exp1
GSM5027547
N3_d9_SSEA4_Sendai_Exp1
GSM5027548
N3_Fib_Sendai_Exp2
GSM5027549
O1_d11_CD13_Sendai_Exp1
GSM5027550
O1_d11_CD13_Sendai_Exp2
GSM5027551
O1_d11_SSEA4_Sendai_Exp1
GSM5027552
O1_d11_SSEA4_Sendai_Exp2
GSM5027553
O1_d13_CD13_Sendai_Exp1
GSM5027554
O1_d13_SSEA4_Sendai_Exp1
GSM5027555
O1_d15_CD13_Sendai_Exp1
GSM5027556
O1_d15_SSEA4_Sendai_Exp1
GSM5027557
O1_d21_CD13_Sendai_Exp2
GSM5027558
O1_d21_SSEA4_Sendai_Exp2
GSM5027559
O1_d29_CD13_Sendai_Exp2
GSM5027560
O1_d29_SSEA4_Sendai_Exp2
GSM5027561
O1_d34_SSEA4_Sendai_Exp2
GSM5027562
O1_d40_SSEA4_Sendai_Exp2
GSM5027563
O1_d47_SSEA4_Sendai_Exp2
GSM5027564
O1_d54_SSEA4_Sendai_Exp2
GSM5027565
O1_d7_CD13_Sendai_Exp1
GSM5027566
O1_d7_SSEA4_Sendai_Exp1
GSM5027567
O1_d9_CD13_Sendai_Exp1
GSM5027568
O1_d9_SSEA4_Sendai_Exp1
GSM5027569
O1_Fib_Sendai_Exp2
GSM5027570
O2_d11_CD13_Sendai_Exp1
GSM5027571
O2_d11_CD13_Sendai_Exp2
GSM5027572
O2_d11_SSEA4_Sendai_Exp1
GSM5027573
O2_d11_SSEA4_Sendai_Exp2
GSM5027574
O2_d13_CD13_Sendai_Exp1
GSM5027575
O2_d13_SSEA4_Sendai_Exp1
GSM5027576
O2_d15_CD13_Sendai_Exp1
GSM5027577
O2_d15_SSEA4_Sendai_Exp1
GSM5027578
O2_d21_CD13_Sendai_Exp2
GSM5027579
O2_d21_SSEA4_Sendai_Exp2
GSM5027580
O2_d29_CD13_Sendai_Exp2
GSM5027581
O2_d29_SSEA4_Sendai_Exp2
GSM5027582
O2_d34_SSEA4_Sendai_Exp2
GSM5027583
O2_d40_SSEA4_Sendai_Exp2
GSM5027584
O2_d47_SSEA4_Sendai_Exp2
GSM5027585
O2_d54_SSEA4_Sendai_Exp2
GSM5027586
O2_d7_CD13_Sendai_Exp1
GSM5027587
O2_d7_SSEA4_Sendai_Exp1
GSM5027588
O2_d9_CD13_Sendai_Exp1
GSM5027589
O2_d9_SSEA4_Sendai_Exp1
GSM5027590
O2_Fib_Sendai_Exp2
GSM5027591
Y1_d11_CD13_Sendai_Exp1
GSM5027592
Y1_d11_CD13_Sendai_Exp2
GSM5027593
Y1_d11_SSEA4_Sendai_Exp1
GSM5027594
Y1_d11_SSEA4_Sendai_Exp2
GSM5027595
Y1_d13_CD13_Sendai_Exp1
GSM5027596
Y1_d13_SSEA4_Sendai_Exp1
GSM5027597
Y1_d15_CD13_Sendai_Exp1
GSM5027598
Y1_d15_SSEA4_Sendai_Exp1
GSM5027599
Y1_d21_CD13_Sendai_Exp2
GSM5027600
Y1_d21_SSEA4_Sendai_Exp2
GSM5027601
Y1_d34_SSEA4_Sendai_Exp2
GSM5027602
Y1_d40_SSEA4_Sendai_Exp2
GSM5027603
Y1_d47_SSEA4_Sendai_Exp2
GSM5027604
Y1_d54_SSEA4_Sendai_Exp2
GSM5027605
Y1_d7_CD13_Sendai_Exp1
GSM5027606
Y1_d7_SSEA4_Sendai_Exp1
GSM5027607
Y1_d9_CD13_Sendai_Exp1
GSM5027608
Y1_d9_SSEA4_Sendai_Exp1
GSM5027609
Y1_Fib_Sendai_Exp2
GSM5027610
Y2_d11_CD13_Sendai_Exp1
GSM5027611
Y2_d11_CD13_Sendai_Exp2
GSM5027612
Y2_d11_SSEA4_Sendai_Exp1
GSM5027613
Y2_d11_SSEA4_Sendai_Exp2
GSM5027614
Y2_d13_CD13_Sendai_Exp1
GSM5027615
Y2_d13_SSEA4_Sendai_Exp1
GSM5027616
Y2_d15_CD13_Sendai_Exp1
GSM5027617
Y2_d15_SSEA4_Sendai_Exp1
GSM5027618
Y2_d21_CD13_Sendai_Exp2
GSM5027619
Y2_d21_SSEA4_Sendai_Exp2
GSM5027620
Y2_d29_CD13_Sendai_Exp2
GSM5027621
Y2_d29_SSEA4_Sendai_Exp2
GSM5027622
Y2_d34_SSEA4_Sendai_Exp2
GSM5027623
Y2_d40_SSEA4_Sendai_Exp2
GSM5027624
Y2_d47_SSEA4_Sendai_Exp2
GSM5027625
Y2_d54_SSEA4_Sendai_Exp2
GSM5027626
Y2_d7_CD13_Sendai_Exp1
GSM5027627
Y2_d7_SSEA4_Sendai_Exp1
GSM5027628
Y2_d9_CD13_Sendai_Exp1
GSM5027629
Y2_d9_SSEA4_Sendai_Exp1
GSM5027630
Y2_Fib_Sendai_Exp2
GSM5027631
O1_failed_to_transiently_reprogram_13days_exp1
GSM5027632
O1_failed_to_transiently_reprogram_15days_exp1
GSM5027633
O1_failed_to_transiently_reprogram_17days_exp1
GSM5027634
O1_negative_control_13days_exp1
GSM5027635
O1_negative_control_15days_exp1
GSM5027636
O1_negative_control_17days_exp1
GSM5027637
O1_transiently_reprogrammed_17days_exp1
GSM5027638
O2_failed_to_transiently_reprogram_13days_exp1
GSM5027639
O2_failed_to_transiently_reprogram_15days_exp1
GSM5027640
O2_failed_to_transiently_reprogram_17days_exp1
GSM5027641
O2_negative_control_13days_exp1
GSM5027642
O2_negative_control_15days_exp1
GSM5027643
O2_negative_control_17days_exp1
GSM5027644
O2_transiently_reprogrammed_13days_exp1
GSM5027645
O2_transiently_reprogrammed_17days_exp1
GSM5027646
O3_failed_to_transiently_reprogram_13days_exp1
GSM5027647
O3_failed_to_transiently_reprogram_15days_exp1
GSM5027648
O3_failed_to_transiently_reprogram_17days_exp1
GSM5027649
O3_negative_control_13days_exp1
GSM5027650
O3_negative_control_15days_exp1
GSM5027651
O3_negative_control_17days_exp1
GSM5027652
O3_transiently_reprogrammed_13days_exp1
GSM5027653
O3_transiently_reprogrammed_15days_exp1
GSM5027654
O3_transiently_reprogrammed_17days_exp1
GSM5027655
Y2_d11_SSEA4
GSM5027656
Y2_d11_CD13
GSM5027657
Y2_d15_SSEA4
GSM5027658
Y2_d15_CD13
GSM5027659
O1_d11_SSEA4
GSM5027660
O1_d11_CD13
GSM5027661
O1_d15_SSEA4
GSM5027662
O1_d15_CD13
GSM5027663
Y1_d9_SSEA4
GSM5027664
Y1_d9_CD13
GSM5027665
Y1_d11_SSEA4
GSM5027666
Y1_d11_CD13
GSM5027667
Y1_d15_SSEA4
GSM5027668
Y1_d15_CD13
GSM5027669
Y2_d9_SSEA4
GSM5027670
Y2_d9_CD13
GSM5027671
O2_d9_SSEA4
GSM5027672
O2_d9_CD13
GSM5027673
O2_d11_SSEA4
GSM5027674
O2_d11_CD13
GSM5027675
O2_d15_SSEA4
GSM5027676
O2_d15_CD13
GSM5027677
O1_failed_to_transiently_reprogram_15days_exp1
GSM5027678
O1_negative_control_15days_exp1
GSM5027679
O2_failed_to_transiently_reprogram_15days_exp1
GSM5027680
O2_negative_control_15days_exp1
GSM5027681
O3_transiently_reprogrammed_15days_exp1
GSM5027682
O3_failed_to_transiently_reprogram_15days_exp1
GSM5027683
O3_negative_control_15days_exp1
GSM5027684
O1_transiently_reprogrammed_17days_exp1
GSM5027685
O1_failed_to_transiently_reprogram_13days_exp1
GSM5027686
O1_negative_control_13days_exp1
GSM5027687
O2_transiently_reprogrammed_13days_exp1
GSM5027688
O2_failed_to_transiently_reprogram_13days_exp1
GSM5027689
O2_negative_control_13days_exp1
GSM5027690
O3_transiently_reprogrammed_13days_exp1
GSM5027691
O3_failed_to_transiently_reprogram_13days_exp1
GSM5027692
O3_negative_control_13days_exp1
GSM5027693
O1_failed_to_transiently_reprogram_17days_exp1
GSM5027694
O1_negative_control_17days_exp1
GSM5027695
O2_transiently_reprogrammed_17days_exp1
GSM5027696
O2_failed_to_transiently_reprogram_17days_exp1
GSM5027697
O2_negative_control_17days_exp1
GSM5027698
O3_transiently_reprogrammed_17days_exp1
GSM5027699
O3_failed_to_transiently_reprogram_17days_exp1
GSM5027700
O3_negative_control_17days_exp1
GSM5027701
O1_failed_to_transiently_reprogram_17days_exp2
GSM5027702
O1_negative_control_17days_exp2
GSM5027703
O2_failed_to_transiently_reprogram_17days_exp2
GSM5027704
O2_negative_control_17days_exp2
GSM5027705
O3_transiently_reprogrammed_17days_exp2
GSM5027706
O3_failed_to_transiently_reprogram_17days_exp2
GSM5027707
O3_negative_control_17days_exp2
GSM5027708
O1 Fib
GSM5027709
O1_failing_to_transiently_reprogram_intermediate_17days_exp2
GSM5027710
O1_negative_control_intermediate_17days_exp2
GSM5027711
O2_transient_reprogramming_intermediate_17days_exp2
GSM5027712
O2_failing_to_transiently_reprogram_intermediate_17days_exp2
GSM5027713
O2_negative_control_intermediate_17days_exp2
GSM5027714
O3_transient_reprogramming_intermediate_17days_exp2
GSM5027715
O3_failing_to_transiently_reprogram_intermediate_17days_exp2
GSM5027716
O3_negative_control_intermediate_17days_exp2
GSM5027717
O1_negative_control_intermediate_15days_exp2
GSM5027718
O2_transient_reprogramming_intermediate_15days_exp2
GSM5027719
O2_failing_to_transiently_reprogram_intermediate_15days_exp2
GSM5027720
O2_negative_control_intermediate_15days_exp2
GSM5027721
O3_transient_reprogramming_intermediate_15days_exp2
GSM5027722
O3_failing_to_transiently_reprogram_intermediate_15days_exp2
GSM5027723
O3_negative_control_intermediate_15days_exp2
GSM5027724
O1_transient_reprogramming_intermediate_17days_exp2
GSM5027725
O2_failing_to_transiently_reprogram_intermediate_10days_exp2
GSM5027726
O2_negative_control_intermediate_10days_exp2
GSM5027727
O3_transient_reprogramming_intermediate_10days_exp2
GSM5027728
O3_failing_to_transiently_reprogram_intermediate_10days_exp2
GSM5027729
O3_negative_control_intermediate_10days_exp2
GSM5027730
O1_transient_reprogramming_intermediate_13days_exp2
GSM5027731
O1_failing_to_transiently_reprogram_intermediate_13days_exp2
GSM5027732
O1_negative_control_intermediate_13days_exp2
GSM5027733
O2_transient_reprogramming_intermediate_13days_exp2
GSM5027734
O2_failing_to_transiently_reprogram_intermediate_13days_exp2
GSM5027735
O2_negative_control_intermediate_13days_exp2
GSM5027736
O3_transient_reprogramming_intermediate_13days_exp2
GSM5027737
O3_failing_to_transiently_reprogram_intermediate_13days_exp2
GSM5027738
O3_negative_control_intermediate_13days_exp2
GSM5027739
O1_transient_reprogramming_intermediate_15days_exp2
GSM5027740
O1_failing_to_transiently_reprogram_intermediate_15days_exp2
GSM5027741
O1_transiently_reprogrammed_10days_exp2
GSM5027742
O1_failed_to_transiently_reprogram_10days_exp2
GSM5027743
O1_negative_control_10days_exp2
GSM5027744
O2_transiently_reprogrammed_10days_exp2
GSM5027745
O2_failed_to_transiently_reprogram_10days_exp2
GSM5027746
O2_negative_control_10days_exp2
GSM5027747
O3_transiently_reprogrammed_10days_exp2
GSM5027748
O3_failed_to_transiently_reprogram_10days_exp2
GSM5027749
O3_negative_control_10days_exp2
GSM5027750
O1_failed_to_transiently_reprogram_13days_exp2
GSM5027751
O1_negative_control_13days_exp2
GSM5027752
O2_transiently_reprogrammed_13days_exp2
GSM5027753
O2_failed_to_transiently_reprogram_13days_exp2
GSM5027754
O2_negative_control_13days_exp2
GSM5027755
O3_transiently_reprogrammed_13days_exp2
GSM5027756
O3_failed_to_transiently_reprogram_13days_exp2
GSM5027757
O3_negative_control_13days_exp2
GSM5027758
O1_failed_to_transiently_reprogram_15days_exp2
GSM5027759
O1_negative_control_15days_exp2
GSM5027760
O2_failed_to_transiently_reprogram_15days_exp2
GSM5027761
O2_negative_control_15days_exp2
GSM5027762
O3_transiently_reprogrammed_15days_exp2
GSM5027763
O3_failed_to_transiently_reprogram_15days_exp2
GSM5027764
O3_negative_control_15days_exp2
GSM5027765
O2 Fib
GSM5027766
O3 Fib
GSM5027767
iPSC 13
GSM5027768
iPSC 21
GSM5027769
O1_transient_reprogramming_intermediate_10days_exp2
GSM5027770
O1_failing_to_transiently_reprogram_intermediate_10days_exp2
GSM5027771
O1_negative_control_intermediate_10days_exp2
GSM5027772
O2_transient_reprogramming_intermediate_10days_exp2
GSM5391783
iPSC_13
GSM5391784
iPSC_21
GSM5391785
O1_failed_to_transiently_reprogram_10days_exp2
GSM5391786
O1_failed_to_transiently_reprogram_13days_exp2
GSM5391787
O1_failed_to_transiently_reprogram_15days_exp2
GSM5391788
O1_failed_to_transiently_reprogram_17days_exp2
GSM5391789
O1_failing_to_transiently_reprogram_intermediate_10days_exp2
GSM5391790
O1_failing_to_transiently_reprogram_intermediate_13days_exp2
GSM5391791
O1_failing_to_transiently_reprogram_intermediate_15days_exp2
GSM5391792
O1_failing_to_transiently_reprogram_intermediate_17days_exp2
GSM5391793
O1_Fib
GSM5391794
O1_negative_control_10days_exp2
GSM5391795
O1_negative_control_13days_exp2
GSM5391796
O1_negative_control_15days_exp2
GSM5391797
O1_negative_control_17days_exp2
GSM5391798
O1_negative_control_intermediate_10days_exp2
GSM5391799
O1_negative_control_intermediate_13days_exp2
GSM5391800
O1_negative_control_intermediate_15days_exp2
GSM5391801
O1_negative_control_intermediate_17days_exp2
GSM5391802
O1_transiently_reprogrammed_10days_exp2
GSM5391803
O1_transient_reprogramming_intermediate_10days_exp2
GSM5391804
O1_transient_reprogramming_intermediate_13days_exp2
GSM5391805
O1_transient_reprogramming_intermediate_15days_exp2
GSM5391806
O1_transient_reprogramming_intermediate_17days_exp2
GSM5391807
O2_failed_to_transiently_reprogram_10days_exp2
GSM5391808
O2_failed_to_transiently_reprogram_13days_exp2
GSM5391809
O2_failed_to_transiently_reprogram_15days_exp2
GSM5391810
O2_failed_to_transiently_reprogram_17days_exp2
GSM5391811
O2_failing_to_transiently_reprogram_intermediate_10days_exp2
GSM5391812
O2_failing_to_transiently_reprogram_intermediate_13days_exp2
GSM5391813
O2_failing_to_transiently_reprogram_intermediate_15days_exp2
GSM5391814
O2_failing_to_transiently_reprogram_intermediate_17days_exp2
GSM5391815
O2_Fib
GSM5391816
O2_negative_control_10days_exp2
GSM5391817
O2_negative_control_13days_exp2
GSM5391818
O2_negative_control_15days_exp2
GSM5391819
O2_negative_control_17days_exp2
GSM5391820
O2_negative_control_intermediate_10days_exp2
GSM5391821
O2_negative_control_intermediate_13days_exp2
GSM5391822
O2_negative_control_intermediate_15days_exp2
GSM5391823
O2_negative_control_intermediate_17days_exp2
GSM5391824
O2_transiently_reprogrammed_10days_exp2
GSM5391825
O2_transiently_reprogrammed_13days_exp2
GSM5391826
O2_transient_reprogramming_intermediate_10days_exp2
GSM5391827
O2_transient_reprogramming_intermediate_13days_exp2
GSM5391828
O2_transient_reprogramming_intermediate_15days_exp2
GSM5391829
O2_transient_reprogramming_intermediate_17days_exp2
GSM5391830
O3_failed_to_transiently_reprogram_10days_exp2
GSM5391831
O3_failed_to_transiently_reprogram_13days_exp2
GSM5391832
O3_failed_to_transiently_reprogram_15days_exp2
GSM5391833
O3_failed_to_transiently_reprogram_17days_exp2
GSM5391834
O3_failing_to_transiently_reprogram_intermediate_10days_exp2
GSM5391835
O3_failing_to_transiently_reprogram_intermediate_13days_exp2
GSM5391836
O3_failing_to_transiently_reprogram_intermediate_15days_exp2
GSM5391837
O3_failing_to_transiently_reprogram_intermediate_17days_exp2
GSM5391838
O3_Fib
GSM5391839
O3_negative_control_10days_exp2
GSM5391840
O3_negative_control_13days_exp2
GSM5391841
O3_negative_control_15days_exp2
GSM5391842
O3_negative_control_17days_exp2
GSM5391843
O3_negative_control_intermediate_10days_exp2
GSM5391844
O3_negative_control_intermediate_13days_exp2
GSM5391845
O3_negative_control_intermediate_15days_exp2
GSM5391846
O3_negative_control_intermediate_17days_exp2
GSM5391847
O3_transiently_reprogrammed_10days_exp2
GSM5391848
O3_transiently_reprogrammed_13days_exp2
GSM5391849
O3_transiently_reprogrammed_15days_exp2
GSM5391850
O3_transiently_reprogrammed_17days_exp2
GSM5391851
O3_transient_reprogramming_intermediate_10days_exp2
GSM5391852
O3_transient_reprogramming_intermediate_13days_exp2
GSM5391853
O3_transient_reprogramming_intermediate_15days_exp2
This SuperSeries is composed of the following SubSeries:
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GSE165176
Multi-omic rejuvenation of human cells by maturation phase transient reprogramming [Sendai_RNAseq]
GSE165177
Multi-omic rejuvenation of human cells by maturation phase transient reprogramming [Transient_RNAseq]
GSE165178
Multi-omic rejuvenation of human cells by maturation phase transient reprogramming [Sendai array]
GSE165179
Multi-omic rejuvenation of human cells by maturation phase transient reprogramming [Transient array]
Relations
BioProject
PRJNA693493
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Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE165180_RAW.tar
1.8 Gb
(http)
(custom)
TAR (of IDAT)
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