|
| Status |
Public on Sep 22, 2021 |
| Title |
Multiomic sequencing of the MGE |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Single-cell multiomic sequencing (RNA+ATAC in the same cells) of the E13.5 medial ganglionic eminence (MGE).
|
| |
|
| Overall design |
Multiomic (RNA (gene expression)/ATAC (chromatin accessibility) libraries were generated for cells isolated from the E13.5 MGE using the 10X Genomics Multiome platform.
|
| |
|
| Contributor(s) |
Allaway KC, Gabitto MI |
| Citation(s) |
34552240 |
|
https://www.nature.com/articles/s41586-021-03933-1
|
| |
| Submission date |
Jan 19, 2021 |
| Last update date |
Oct 01, 2021 |
| Contact name |
Kathryn Allaway |
| Organization name |
Broad Institute
|
| Department |
Stanley Center for Psychiatric Disease
|
| Lab |
Fishell Lab
|
| Street address |
75 Ames St
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02142 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (2) |
|
| This SubSeries is part of SuperSeries: |
| GSE165233 |
Genetic and epigenetic coordination of cortical interneuron development |
|
| Relations |
| BioProject |
PRJNA693284 |
| SRA |
SRP302390 |
