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Series GSE165018 Query DataSets for GSE165018
Status Public on Sep 22, 2021
Title MEF2C CUT&RUN in PV and SST interneurons.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary CUT&RUN for MEF2C in mature PV+ and SST+ cortical interneurons to characterize the differential usage of this transcription factor by these populations.
 
Overall design CUT&RUN against MEF2C in PV+ and SST+ cortical interneurons isolated from the mature cortex from PV-Cre;INTACT and SST-Cre;INTACT mice.
 
Contributor(s) Wang C, Allaway KC, Gabitto MI
Citation(s) 34552240
https://www.nature.com/articles/s41586-021-03933-1
Submission date Jan 18, 2021
Last update date Oct 01, 2021
Contact name Kathryn Allaway
Organization name Broad Institute
Department Stanley Center for Psychiatric Disease
Lab Fishell Lab
Street address 75 Ames St
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM5024592 pv_mef2c_cr_rep1
GSM5024593 pv_mef2c_cr_rep2
GSM5024594 sst_mef2c_cr_rep1
This SubSeries is part of SuperSeries:
GSE165233 Genetic and epigenetic coordination of cortical interneuron development
Relations
BioProject PRJNA692975
SRA SRP302186

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165018_RAW.tar 128.7 Mb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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