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| Status |
Public on Nov 02, 2022 |
| Title |
Transcriptome profile of Escherichia coli K12 MG1655 cells lacking selected genes |
| Organism |
Escherichia coli str. K-12 substr. MG1655 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The aim of the study was to compare the transcriptome of E. coli K12 MG1655 cells lacking genes known to induce the Rtc RNA repair system, such as gor, mazF and srmB, to wild-type cells. In all cases, less than 1% of the genes were found to be differentially expressed.
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| Overall design |
E. coli K12 MG1655 mutants versus wild-type.
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| |
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| Contributor(s) |
Kotta-Loizou I |
| Citation missing |
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| |
| Submission date |
Jan 17, 2021 |
| Last update date |
Nov 04, 2022 |
| Contact name |
Ioly Kotta-Loizou |
| E-mail(s) |
i.kotta-loizou13@imperial.ac.uk
|
| Organization name |
Imperial College London
|
| Department |
Life Sciences
|
| Street address |
South Kensington Campus
|
| City |
London |
| ZIP/Postal code |
SW7 2AZ |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL21117 |
Illumina NextSeq 500 (Escherichia coli str. K-12 substr. MG1655) |
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| Samples (8)
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| This SubSeries is part of SuperSeries: |
| GSE165118 |
Transcriptome profile of Escherichia coli K12 MG1655 under Rtc-inducing conditions |
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| Relations |
| BioProject |
PRJNA692772 |
| SRA |
SRP302137 |
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