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Series GSE161699 Query DataSets for GSE161699
Status Public on Jul 20, 2021
Title Splicing regulation of large exons secures phase-separation of transcription factors in vertebrates
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34605568
Submission date Nov 18, 2020
Last update date Oct 19, 2021
Contact name Akio Masuda
E-mail(s) amasuda@med.nagoya-u.ac.jp
Phone +81-52-744-2447
Organization name Nagoya University Graduate School of Medicine
Lab Neurogenetics
Street address 65 tsurumai-cho, Showa-ku
City Nagoya
State/province Aichi
ZIP/Postal code 466-8550
Country Japan
 
Platforms (2)
GPL16417 Illumina MiSeq (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (9)
GSM4910718 RNA-seq_siControl_C2C12
GSM4910719 RNA-seq_siSrsf3_C2C12
GSM4910720 RNA-seq_siHnrnpk_C2C12
This SuperSeries is composed of the following SubSeries:
GSE161601 RNA-seqs of SRSF3 and hnRNPK depleted C2C12 cells
GSE161602 Genome-wide maps of RNA-protein interactions of SRSF3, hnRNPK and CPSF6
Relations
BioProject PRJNA679198

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE161699_RAW.tar 70.7 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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