|
| Status |
Public on Nov 16, 2020 |
| Title |
CUT&RUN studies comparing occupancy of MAX, MGA, MYC and L3MBTL2 occupancy in Empty vector and sgMGA transduced A549 lung adenocarcinoma cells |
| Organism |
Homo sapiens |
| Experiment type |
Other
|
| Summary |
The goal of this study was to examine the genomic occupancy of MAX, MGA, MYC and L3MBTL2 in MGA depleted vs. control cells
|
| |
|
| Overall design |
Two independent sets of control Empty and one set of sgMGA A549 cells
|
| |
|
| Contributor(s) |
Mathsyaraja H, Eisenman RN |
| Citation(s) |
34236315 |
| |
| Submission date |
Nov 16, 2020 |
| Last update date |
Jul 20, 2021 |
| Contact name |
Haritha Mathsyaraja |
| E-mail(s) |
hmathsya@fredhutch.org
|
| Organization name |
Fred Hutch
|
| Department |
Basic Sciences
|
| Lab |
Robert N Eisenman
|
| Street address |
1100 Fairview Ave N
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (14)
|
| GSM4909794 |
IgG control IP in Empty transduced A549 cells set#1 |
| GSM4909795 |
L3MBTL2 IP in Empty transduced A549 cells set#1 |
| GSM4909796 |
L3MBTL2 IP in sgMGA transduced A549 cells set#1 |
| GSM4909797 |
MAX IP in Empty transduced A549 cells set#1 |
| GSM4909798 |
MAX IP in sgMGA transduced A549 cells set#1 |
| GSM4909799 |
MGA IP in Empty transduced A549 cells set#1 |
| GSM4909800 |
MGA IP in sgMGA transduced A549 cells set#1 |
| GSM4909801 |
MYC IP in Empty transduced A549 cells set#1 |
| GSM4909802 |
MYC IP in sgMGA transduced A549 cells set#1 |
| GSM4909803 |
IgG control IP in Empty transduced A549 cells set#2 |
| GSM4909804 |
L3MBTL2 IP in Empty transduced A549 cells set#2 |
| GSM4909805 |
MAX IP in Empty transduced A549 cells set#2 |
| GSM4909806 |
MGA IP in Empty transduced A549 cells set#2 |
| GSM4909807 |
MYC IP in Empty transduced A549 cells set#2 |
|
| Relations |
| BioProject |
PRJNA678676 |
| SRA |
SRP292712 |
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