|
| Status |
Public on Nov 13, 2020 |
| Title |
RNA-seq on human muscle progenitor cells cultured with (1000 uM) or without serine and glycine |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
To determine the transcriptional response to serine and glycine deprivation in human muscle progenitor cells
|
| |
|
| Overall design |
RNA was harvested from human muscle progenitor cells (n = 5 separate donors) after 5 days of culture with or without 1000uM serine/glycine
|
| |
|
| Contributor(s) |
Thalacker-Mercer AE, Gheller BJ, Blum JE, Lim EW, Handzlik MK, Fong EH, Ko AC, Khanna S, Gheller ME, Bender EL, Alexander MS, Stover PJ, Field MS, Cosgrove BD, Metallo CM |
| Citation(s) |
33122122 |
| |
| Submission date |
Nov 12, 2020 |
| Last update date |
Feb 12, 2021 |
| Contact name |
Anna E Thalacker-Merc er |
| Organization name |
University of Alabama at Birmingham
|
| Street address |
1720 University Blvd
|
| City |
Birmingham |
| State/province |
Alabama |
| ZIP/Postal code |
35294 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (10)
|
| GSM4905257 |
+Serine/Glycine Replicate 1_From Donor 1 |
| GSM4905258 |
+Serine/Glycine Replicate 2_From Donor 2 |
| GSM4905259 |
+Serine/Glycine Replicate 3_From Donor 3 |
| GSM4905260 |
+Serine/Glycine Replicate 4_From Donor 4 |
| GSM4905261 |
+Serine/Glycine Replicate 5_From Donor 5 |
| GSM4905262 |
-Serine/Glycine Replicate 1_From Donor 1 |
| GSM4905263 |
-Serine/Glycine Replicate 2_From Donor 2 |
| GSM4905264 |
-Serine/Glycine Replicate 3_From Donor 3 |
| GSM4905265 |
-Serine/Glycine Replicate 4_From Donor 4 |
| GSM4905266 |
-Serine/Glycine Replicate 5_From Donor 5 |
|
| Relations |
| BioProject |
PRJNA677950 |
| SRA |
SRP292346 |
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