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| Status |
Public on Nov 10, 2023 |
| Title |
Transcriptomic analysis of J0951/Col, J0951/UAS_YUC4, J0571/UAS_YUC4, Q2500/UAS_YUC4, J0121/UAS_YUC4 andQ0990/UAS_YUC4. |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The goal of this study is to investigate the effect of enhanced auxin biosynthesis on gene expression in specific root tissues. We isolated total RNA from the roots of 5_day_old J0951/Col, J0951/UAS_YUC4, J0571/UAS_YUC4, Q2500/UAS_YUC4, J0121/UAS_YUC4 andQ0990/UAS_YUC4 seedlings. We found that there was a statistically significant enrichment in genes annotated as being linked to cell wall related genes.
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| Overall design |
We isolated total RNA from the roots of 5_day_old J0951/Col, J0951/UAS_YUC4, J0571/UAS_YUC4, Q2500/UAS_YUC4, J0121/UAS_YUC4 andQ0990/UAS_YUC4 seedlings.
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| Contributor(s) |
Ding T, Ding Z |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 11, 2020 |
| Last update date |
Nov 10, 2023 |
| Contact name |
Ting Ting Ding |
| E-mail(s) |
201520224@mail.sdu.edu.cn
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| Phone |
15098833156
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| Organization name |
shandong university
|
| Street address |
binhai street NO.72
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| City |
qingdao |
| ZIP/Postal code |
266237 |
| Country |
China |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (18)
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| Relations |
| BioProject |
PRJNA676150 |
| SRA |
SRP292222 |
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