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Series GSE160966 Query DataSets for GSE160966
Status Public on Jan 07, 2022
Title The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by pausing POL II at pro-differentiation genes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35294876
Submission date Nov 06, 2020
Last update date Apr 06, 2022
Contact name Shaun Mahony
E-mail(s) mahony@psu.edu
Phone 814-865-3008
Organization name Penn State University
Department Biochemistry & Molecular Biology
Lab Shaun Mahony
Street address 404 South Frear Bldg
City University Park
State/province PA
ZIP/Postal code 16802
Country USA
 
Platforms (3)
GPL16417 Illumina MiSeq (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (83)
GSM4886908 ChIPseq SETD1A in wildtype ES cells (iCre) replicate 1
GSM4886909 ChIPseq SETD1A in wildtype ES cells (iCre) replicate 2
GSM4886910 ChIPseq NELF in wildtype ES cells (iCre) replicate 1
This SuperSeries is composed of the following SubSeries:
GSE160959 The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by pausing POL II at pro-differentiation genes [ChIP-Seq]
GSE160960 The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by pausing POL II at pro-differentiation genes [RNA-Seq]
GSE160962 The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by pausing POL II at pro-differentiation genes [scRNA-Seq]
Relations
BioProject PRJNA675007

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160966_RAW.tar 33.2 Gb (http)(custom) TAR (of BW, H5, TXT)
SRA Run SelectorHelp

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